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Journal Article (35)
21.
Journal Article
11 (10), pp. 1889 - 1907 (2016)
Analyzing and interpreting genome data at the network level with ConsensusPathDB. Nature Protocols 22.
Journal Article
48 (6), pp. 593 - 599 (2016)
Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences. Nature Genetics 23.
Journal Article
526 (7571), pp. 68 - 74 (2015)
A global reference for human genetic variation. Nature 24.
Journal Article
112 (31), pp. E4236 - E4245 (2015)
Simultaneous deletion of the methylcytosine oxidases Tet1 and Tet3 increases transcriptome variability in early embryogenesis. Proceedings of the National Academy of Sciences of the United States of America 25.
Journal Article
17 (5), pp. 545 - 557 (2015)
The histone deacetylase SIRT6 controls embryonic stem cell fate via TET-mediated production of 5-hydroxymethylcytosine. Nature Cell Biology 26.
Journal Article
42 (14), e110 (2014)
ARH-seq: identification of differential splicing in RNA-seq data. Nucleic Acids Research (London) 27.
Journal Article
15 (8), pp. 777 - 788 (2014)
Epigenomic analysis of primary human T cells reveals enhancers associated with TH2 memory cell differentiation and asthma susceptibility. Nature Immunology 28.
Journal Article
5, 5:3934 (2014)
Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel. Nature Communications 29.
Journal Article
30 (2), pp. 284 - 286 (2014)
MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments. Bioinformatics 30.
Journal Article
30 (2), pp. 284 - 286 (2014)
MEDIPS: genome wide differential coverage analysis of sequencing data derived from DNA enrichment experiments. Bioinformatics 31.
Journal Article
30 (2), pp. 284 - 286 (2014)
MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments. Bioinformatics 32.
Journal Article
342 (6154), p. 1235587 - 1235587 (2013)
Integrative annotation of variants from 1092 humans: application to cancer genomics. Science 33.
Journal Article
9 (2), p. e1003250 - e1003250 (2013)
DNA–Methylome Analysis of Mouse Intestinal Adenoma Identifies a Tumour-Specific Signature That Is Partly Conserved in Human Colon Cancer. PLoS Genetics 34.
Journal Article
130 (2), pp. 427 - 439 (2012)
RNA-Seq provides new insights in the transcriptome responses induced by the carcinogen benzo[a]pyrene. Toxicological Sciences 35.
Journal Article
491 (7422), pp. 56 - 65 (2012)
An integrated map of genetic variation from 1,092 human genomes. Nature Book Chapter (1)
36.
Book Chapter
Quantitative Comparison of Large-Scale DNA Enrichment Sequencing Data. In: Statistical Genomics (Eds. Mathé, E.; Davis, S.) (2016)
Thesis - PhD (1)
37.
Thesis - PhD
Computational Analysis of Genome-wide Methylation Enrichment Experiments. Dissertation, xii, 125 pp. (2017)
Thesis - Master (1)
38.
Thesis - Master
Analysis of RNA-seq experiments. Master, Freie Universität, Berlin (2011)
Preprint (2)
39.
Preprint
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification. (2023)
40.
Preprint
Long-read transcriptome sequencing analysis with IsoTools. (2021)