All Publications

Max Planck Institute for Molecular Genetics

The following publications were published exclusively under the affiliation of the Max Planck Society. For publications by the principal investigator outside of the Max Planck Society, see the links on the lower left.

Journal Article (238)

Journal Article

Kaluza, P.; Ipsen, M.; Vingron, M.; Mikhailov, A. S.: Design and statistical properties of robust functional networks: A model study of biological signal transduction. Physical Review: E, Statistical, Nonlinear and Soft Matter Physics E75, 015101 (2007)

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Dieterich, C.; Franz, M. W.; Vingron, M.: Developments in CORG: a gene-centric comparative genomics resource. Nucleic Acids Research 35 (Database issue), pp. D32 - D35 (2007)

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Manke, T.; Demetrius, L.; Vingron, M.: An entropic characterization of protein interaction networks and cellular robustness. Interface: Journal of the Royal Society 11 (3), pp. 843 - 850 (2006)

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Zemojtel, T.; Fröhlich, A.; Palmieri, M. C.; Kolanczyk, M.; Mikula, I.; Wyrwicz, L. S.; Wanker, E. E.; Mundlos, S.; Vingron, M.; Martasek, P. et al.; Durner, J.: Plant nitric oxide synthase: a never-ending story? Trends in Plant Science 11 (11), pp. 524 - 525 (2006)

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Staub, E.; Mackowiak, S.; Vingron, M.: An inventory of yeast proteins that are associated with nucleoli and ribosomal components. Genome Biology: Biology for the Post-Genomic Era 7 (10), p. R98 - R98 (2006)

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Dohm, J. C.; Vingron, M.; Staub, E.: Horizontal Gene Transfer in Aminoacyl-tRNA Synthetases Including Leucine-Specific Subtypes. Journal of Molecular Evolution 63 (4), pp. 437 - 447 (2006)

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Yeang, C.-H.; Vingron, M.: A joint model of regulatory and metabolic networks. BMC Bioinformatics 7, p. 332 - 332 (2006)

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Steinhoff, C.; Vingron, M.: Review: Normalization and Quantification of Differential Expression. Briefings in Bioinformatics 7 (2), pp. 166 - 177 (2006)

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Luz, H.; Vingron, M.: Family specific rates of protein evolution. Bioinformatics 10, pp. 1166 - 1171 (2006)

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Pape, U. J.; Grossmann, S.; Hammer, S.; Sperling, S.; Vingron, M.: A new statistical model to select target sequences bound by transcription factors. Genome Informatics 17 (1), pp. 134 - 140 (2006)

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Roepcke, S.; Zhi, D.; Vingron, M.; Arndt, P. F.: Identification of highly specific localized sequence motifs in human ribosomal protein gene promoters. Gene 365, pp. 48 - 56 (2006)

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Irlbacher, H.; Franke, J.; Manke, T.; Vingron, M.; Ehrenhofer-Murray, A. E.: Control of replication initiation and heterochromatin formation in Saccharomyces cerevisiae by a regulator of meiotic gene expression. Genes & Development 19 (15), pp. 1811 - 1822 (2005)

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Zhang, J.; Vingron, M.; Hoehe, M. R.: Haplotype reconstruction for diploid populations. Human Heredity 59 (3), pp. 144 - 156 (2005)

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Roepcke, S.; Grossmann, S.; Rahmann, S.; Vingron, M.: T-Reg Comparator: an analysis tool for the comparison of position weight matrices. Web Server Issue, pp. W438 - W341 (2005)

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Roepcke, S.; Fiziev, P.; Seeburg, P. H.; Vingron, M.: SVC: structured visualization of evolutionary sequence conservation. Web Server Issue, pp. W271 - W273 (2005)

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Belyakin, S. N.; Christophides, G. K.; Alekseyenko, A. A.; Kriventseva, E. V.; Belyaeva, E. S.; Nanayev, R. A.; Makunin, I. V.; Hild, M.; Beckmann, B.; Haas, S. A. et al.; Koch, B.; Solovyev, V.; Busold, C.; Fellenberg, K.; Boutros, M.; Vingron, M.; Sauer, F.; Hoheisel, J. D.; Paro, R.: Genomic analysis of Drosophila chromosome underreplication reveals a link between replication control and transcriptional territories. Proceedings of the National Academy of Sciences 107 (23), pp. 8269 - 8274 (2005)

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Dieterich, C.; Grossmann, S.; Tanzer, A.; Röpcke, S.; Arndt, P. F.; Stadler, P. F.; Vingron, M.: Comparative promoter region analysis powered by CORG. BMC Gnomics 6, p. 24 - 24 (2005)

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Krause, A.; Stoye, J.; Vingron, M.: Large Scale Hierarchical Clustering of Protein Sequences. BMC Bioinformatics 6, p. 15 - 15 (2005)

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Gupta, S.; Vingron, M.; Haas, S. A.: T-STAG: resource and web-interface for tissue-specific transcripts and genes. Nucleic Acids Research 33 ((Web Server Issue)), pp. W654 - W658 (2005)

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Journal Article

Michael, M.; Dieterich, C.; Vingron, M.: SITEBLAST-rapid and sensitive local alignment of genomic sequences employing motif anchors. Bioinformatics 21 (9), pp. 2093 - 2094 (2005)

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