Journal Article (3260)

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Plötner, M.; Meixner, M.; Poustka, A. J.; Grau, J. H.; Theusner, S.; Liere, K.; Schüllermann, T.; Doležálková‑Kaštánková, M.; Choleva, L.; Plötner, J.: New insights into the molecular basis of gametogenesis in the hybridogenetic water frog Pelophylax esculentus. Scientific Reports 16, 5012 (2026)
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Soares, M. V.; Escamilla Gómez, V.; Azevedo, R. I.; Pereira, P. N.G.; Caballero-Velázquez, T.; Mendes, L.; Alho, A. C.; García-Guerrero, E.; García-Calderón, C. B.; Tharmaratnam, K. et al.; Cabral, I. A.; Ribeiro, A. C.; Juncal, C.; Roncon, S.; Pais, A. T.; Rodríguez-Gil, A.; Espada, E. L. d. S.; Rodrigues, A.; Garção, A.; Yaspo, M.-L.; Warnatz, H.-J.; Lehrach, H. R.; Ward, L.; Barbosa-Morais, N. L.; Quintas, A. M.; Palmela, P.; Caldas, C. m. f.; Ferreira, R.; Leite, L.; Martins, C.; Lourenço, F.; Moreno, R.; Campilho, F.; Cheyne, C. P.; Garcia-Finana, M.; Campos, A. M.; Baron, F.; Arpinati, M.; Hoffmann, P.; Edinger, M.; Koreth, J.; Ritz, J.; Pinho Vaz, C.; Pérez-Simón, J. A. A.; Lacerda, J. F.: Phase I/II Trials of Donor Regulatory T Cells for the Treatment of Steroid-Refractory Chronic Graft versus Host Disease. Blood Advances (2026)
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Heß, A.; Seelow, D.; Kretzmer, H.: DNAvi: integration, statistics, and visualization of cell-free DNA fragment traces. Bioinformatics (2026)
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Schliephake, F.; Lurje, I.; Uluk, D.; Eden, J.; Czigany, Z.; Pein, J.; Husen, P.; Engelmann, C.; Michalski, C.; Kohlhepp, M. et al.; Strnad, P.; Dutkowski, P.; Tacke, F.; Neumann, U. P.; Meierhofer, D.; Lurje, G.: Effects of hypothermic oxygenated machine perfusion on bile composition after liver transplantation – Findings from a randomized controlled trial. JHEP Reports 8, 101647, p. 101647 (2026)
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Das, R.; Malard, L.; Pearce, D. A.; Convey, P.; Rahlff, J.: Diversity of DNA viruses in the atmosphere of sub-Antarctic South Georgia. Frontiers in Microbiology 16 (2026)
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Iyer, D. P.; Heidari Khoei, H.; Rivron, N.; Bulut-Karslioglu, A.: Putting mammalian early embryonic cells into dormancy. Nature Protocols (2026)
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Grimmer, G.; Muenzner, J.; Schmacht, M.; Subirana, M. A.; Valido, I. H.; Nickl, P.; Dietrich, P. M.; Donskyi, I. S.; Schaumlöffel, D.; Hageböck, M. et al.; Mülleder, M.; Ralser, M.; Haase, H.; Senz, M.; Maares, M.; Keil, C.: Unlocking the Zn-enriching potential of industrial yeast strains—an experimental journey from metal analysis to proteomics. Applied Microbiology and Biotechnology 110, 12 (2026)
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Gerletti, P.; Gubela, N.; Escudié, J.-B.; Kühnert, D.; Von Kleist, M.: SIMPLICITY is an agent-based, multi-scale mathematical model to study SARS-CoV-2 intra- and between-host evolution. Communications Biology (2026)
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Heider, S.; Fischer, C.; Secener, A. K.; Vallecillo-Garcı́a, P.; Kotsaris, G.; Meisen, Z. G.; Pawolski, V.; Giesecke-Thiel, C.; Conrad, T.; Schulz, T. J. et al.; Sauer, S.; Stricker, S.: The dorsal aortic compartment is a developmental source of brown adipose tissue in mice. Nature Communications 17, 286 (2026)
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Gubela, N.; Kim, H.-y.; Lunchenkov, N.; Stern, D.; Michel, J.; Nitsche, A.; Schmidt, A. J.; Marcus, U.; von Kleist, M.: Behavior change and infection induced immunity led to the decline of the 2022 Mpox outbreak in Berlin. Communications Medicine (2026)
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Wang, Z.; Farztdinov, V.; Sinn, L. R.; Tober-Lau, P.; Ludwig, D.; Freiwald, A.; Amari, F.; Textoris-Taube, K.; Niewienda, A.; Welter, A. S. et al.; Wei, A. A. J.; Luckau, L.; Kurth, F.; Selbach, M.; Hartl, J.; Mülleder, M.; Ralser, M.: Cross-platform clinical proteomics using the Charité open standard for plasma proteomics (OSPP). Nature Communications 16, 11377 (2025)
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Mutzel, V.; Schwämmle, T.; Oeverdieck, S.; Librenjak , L.; Boesen , B.; Bothe, A. M.; Gjaltema, R. A. F.; Dunkel, I.; Noviello, G.; Schulz, E. G.: Antisense transcription can induce expression memory via stable promoter repression. Genome Biology 26, 430 (2025)
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Perelman, R. T.; Church, G. M.; Stein, J.: A Simple, Ultrastable, and Cost‐Effective Oxygen‐Scavenging System for Long‐Term DNA‐PAINT Imaging. Small (2025)
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Rezvani, M.; Quach, S.; Lewis, K.; Saiki, N.; Xue, C.; Kimura, M.; Iwasawa, K.; Weihs, J.; Elzobair, T.; Al Reza, H. et al.; Cai, Y.; Zhang, R.; Milton, Y.; Chaturvedi, P.; Thorner, K.; Nayak, R. C.; Munera, J.; Kramer, P.; Davis, B. R.; Balamurugan, A. N.; Ahmed, Y. A.; Finke, M.; Behncke, R. Y.; Guillot, A.; Hägerling, R.; Polansky, J. K.; Bufler, P.; Cancelas, J. A.; Zorn, A.; Wells, J. M.; Yoshimoto, M.; Takebe, T.: Modeling Immune Lineage Co-Development in Human Pluripotent Stem Cell-derived Liver Organoids. Journal of Hepatology (2025)
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Gottlieb, S. G.; Reinert, K.: Engineering rank queries on bit vectors and strings. Algorithms for Molecular Biology 20, 21 (2025)
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Serrano, A.; Puerner, C.; Chevalier, L.; Plumb, E.; Elferich, J.; Diggs, S.; Sinn, L. R.; Grigorieff, N.; Ralser, M.; Delarue, M. et al.; Bassilana, M.; Arkowitz, R. A.: Decreased cytoplasmic crowding via inhibition of ribosome biogenesis can trigger Candida albicans filamentous growth. Nature Microbiology 11, pp. 169 - 179 (2025)
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Hakomäki, H.; Pitkänen, S.; Levonen, A.-L.; Honkakoski, P.; Greco, D.; D'Alessandro, N.; Saarimäki, L. A.; Viegas, S.; Godinho, C.; Fyhrquist, N. et al.; Wincent, E.; Lauschke, V. M.; Hukkanen, J.; Hakkola, J.; Vallier, L.; Fortino, V.; Afantitis, A.; Sawatani, T.; Guzman, T. J.; Cnop, M.; Nawrot, T.; Harlid, S.; Vinnars, M.-T.; Tardon, A.; Grimalt, J. O.; Küblbeck, J.; Rysä, J.: Unmasking metabolic disruptors: The NEMESIS project's quest for Novel Biomarkers, Evidence on Adverse Effects, and Efficient Methodologies. Open Research Europe 4, p. 194 (2025)
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Sashittal, P.; Zhang, R. Y.; Law, B. K.; Schmidt, H.; Strzalkowski, A.; Bolondi, A.; Chan, M. M.; Raphael, B. J.: Inferring cell differentiation maps from lineage tracing data. Nature Methods (2025)
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Swanepoel , C. M.; Wang, G.; Zhang, L.; Brändl, B.; Bauer, H.; Tsaytler, P.; Müller, F.-J.; Herrmann, B. G.; Mueller, J. L.: Acquisition of ampliconic sequences marks a selfish mouse t-haplotype. Nature Communications 17, 21 (2025)
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Grüning, N.; Agostini, F.; Caldana, C.; Hartl, J.; Heinemann, M.; Keller, M. A.; Krüsemann, J. L.; Lamperti, C.; Linster, C. L.; Lindner, S. N. et al.; Muenzner, J.; Nielsen, J.; Nikoloski, Z.; Siebers, B.; Snoep, J. L.; Tenenboim, H.; Teusink, B.; Williams, S. J.; Wamelink, M. M. C.; Ralser, M.: The return of metabolism: biochemistry and physiology of glycolysis. Biological Reviews (2025)
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