Lister, N. C.; Milton, A. M.; Patel, H. R.; Waters, S. A.; Hanrahan, B. J.; McIntyre, K. L.; Livernois, A. M.; Horspool, W. B.; Wee, L. K.; Ringel, A. R. et al.; Mundlos, S.; Robson, M. I.; Shearwin-Whyatt, L.; Grützner, F.; Marshall Graves, J. A.; Ruiz-Herrera, A.; Waters, P. D.: Incomplete transcriptional dosage compensation of chicken and platypus sex chromosomes is balanced by post-transcriptional compensation. PNAS 121 (32), e2322360121 (2024)

Dimartino, P.; Zadorozhna, M.; Yumiceba, V.; Basile, A.; Cani, I.; Melo, U. S.; Henck, J.; Breur, M.; Tonon, C.; Lodi, R. et al.; Brusco, A.; Pippucci, T.; Koufi, F.-D.; Boschetti, E.; Ramazzotti, G.; Manzoli, L.; Ratti, S.; Vairo, F. P. E.; Delatycki, M. B.; Vaula, G.; Cortelli, P.; Bugiani, M.; Spielmann, M.; Giorgio, E.: Structural Variants at the LMNB1 Locus: Deciphering Pathomechanisms in Autosomal Dominant Adult-Onset Demyelinating Leukodystrophy. Annals of Neurology (2024)

Özgüldez, H. Ö.; Bulut-Karslioglu, A.: Dormancy, Quiescence, and Diapause: Savings Accounts for Life. Annual Review of Cell and Developmental Biology 40, S. 16.1 - 16.25 (2024)

Naderi, J.; Magalhaes, A. P.; Kibar, G.; Stik, G.; Zhang, Y.; Mackowiak, S. D.; Wieler, H. M.; Rossi, F.; Buschow, R.; Christou-Kent, M. et al.; Alcoverro-Bertran, M.; Graf, T.; Vingron, M.; Hnisz, D.: An activity-specificity trade-off encoded in human transcription factors. Nature Cell Biology (2024)

Batki, J.; Hetzel, S.; Schifferl, D.; Bolondi, A.; Walther, M.; Wittler, L.; Grosswendt, S.; Herrmann, B. G.; Meissner, A.: Extraembryonic gut endoderm cells undergo programmed cell death during development. Nature Cell Biology 26 (6), S. 868 - 877 (2024)

Pardo-Palacios, F. J.; Wang, D.; Reese, F.; Diekhans, M.; Carbonell-Sala, S.; Williams, B.; Loveland, J. E.; De Maria, M.; Adams, M. S.; Balderrama-Gutierrez, G. et al.; Behera, A. K.; Gonzalez, J. M.; Hunt, T.; Lagarde, J.; Liang, C. E.; Li, H.; Jerryd Meade, M.; Moraga Amador, D. A.; Prjibelski, A. D.; Birol, I.; Bostan, H.; Brooks, A. M.; Hasan Celik, M.; Chen, Y.; Du, M. R. M.; Felton, C.; Goke, J.; Hafezqorani, S.; Herwig, R.; Kawaji, H.; Lee, J.; Liang Li, J.; Lienhard, M.; Mikheenko, A.; Mulligan, D.; Ming Nip, K.; Pertea, M.; Ritchie, M. E.; Sim, A. D.; Tang, A. D.; Kei Wan, Y.; Wang, C.; Wong, B. Y.; Yang, C.; Barnes, I.; Berry, A.; Capella, S.; Dhillon, N.; Fernandez-Gonzalez, J. M.; Ferrandez-Peral, L.; Garcia-Reyero, N.; Goetz, S.; Hernandez-Ferrer, C.; Kondratova, L.; Liu, T.; Martinez-Martin, A.; Menor, C.; Mestre-Tomas, J.; Mudge, J. M.; Panayotova, N. G.; Paniagua, A.; Repchevsky, D.; Rouchka, E.; Saint-John, B.; Sapena, E.; Sheynkman, L.; Laird Smith, M.; Suner, M. M.; Takahashi, H.; Youngworth, I. A.; Carninci, P.; Denslow, N. D.; Guigo, R.; Hunter, M. E.; Tilgner, H. U.; Wold, B. J.; Vollmers, C.; Frankish, A.; Fai Au, K.; Sheynkman, G. M.; Mortazavi, A.; Conesa, A.; Brooks, A. N.: Systematic assessment of long-read RNA-seq methods for transcript identification and quantification. Nature Methods 21 (7), S. 1349 - 1363 (2024)

Springer, C.; Binsch, C.; Weide, D.; Toska, L.; Cremer, A. L.; Backes, H.; Scheel, A. K.; Espelage, L.; Kotzka, J.; Sill, S. et al.; Kurowski, A.; Daebin, K.; Karpinski, S.; Schnurr, T. M.; Hansen, T.; Hartwig, S.; Lehr, S.; Cames, S.; Brüning, J.; Lienhard, M.; Herwig, R.; Börno, S.; Timmermann, B.; Al-Hasani, H.; Chadt, A.: Depletion of TBC1D4 improves the metabolic exercise response by overcoming genetically induced peripheral insulin resistance. Diabetes 73 (7), S. 1058 - 1071 (2024)

van der Weijden, V. A.; Bulut-Karslioglu, A.: Embryos burn fat in standby. Trends in Cell Biology (2024)

Bolondi, A.; Law, B. K.; Kretzmer, H.; Gassaloglu, S. I.; Buschow, R.; Riemenschneider, C.; Yang, D.; Walther, M.; Veenvliet, Jesse V.; Meissner, A. et al.; Smith, Z. D.; Chan, M. M.: Reconstructing axial progenitor field dynamics in mouse stem cell-derived embryoids. Developmental Cell 59 (12), S. 1489 - 1505 (2024)

Zhao, Y.; Kohl, C.; Rosebrock, D.; Hu, Q.; Hu, Y.; Vingron, M.: CAbiNet: joint clustering and visualization of cells and genes for single-cell transcriptomics. Nucleic Acids Research, gkae480 (2024)

Borisova, E.; Newman, A. G.; Couce Iglesias, M.; Dannenberg, R.; Schaub, T.; Qin, B.; Rusanova, A.; Brockmann, M.; Koch, J.; Daniels, M. et al.; Turko, P.; Jahn, O.; Kaplan, D. R.; Rosário, M.; Iwawaki, T.; Spahn, C. M. T.; Rosenmund, C.; Meierhofer, D.; Kraushar, M. L.; Tarabykin, V.; Ambrozkiewicz, M. C.: Protein translation rate determines neocortical neuron fate. Nature Communications 15 (1), 4879 (2024)

Künzel, S. E.; Frentzel, D. P.; Flesch, L. T. M.; Knecht, V. A.; Rübsam, A.; Dreher, F.; Schütte, M.; Dubrac, A.; Lange, B.; Yaspo, M.-L. et al.; Lehrach, H.; Joussen, A. M.; Zeitz, O.: AI-driven discovery of blood xenobiotic biomarkers in neovascular age-related macular degeneration using iterative random forests. Graefe's Archive for Clinical and Experimental Ophthalmology (2024)

Andrique, C.; Bonnet, A. L.; Dang, J.; Lesieur, J.; Krautzberger, A. M.; Baroukh, B.; Torrens, C.; Sadoine, J.; Schmitt, A.; Rochefort, G. Y. et al.; Bardet, C.; Six, I.; Houillier, P.; Tharaux, P. L.; Schrewe, H.; Gaucher, C.; Chaussain, C.: Vasorin as an actor of bone turnover? Journal of Cellular Physiology 239 (6), e31257 (2024)

Campana , P. A.; Prasse , P.; Lienhard, M.; Thedinga, K.; Herwig, R.; Scheffer , T.: Cancer drug sensitivity estimation using modular deep Graph Neural Networks. NAR: genomics and bioinformatics 6 (2), lqae043 (2024)

Gribben, C.; Galanakis, V.; Calderwood, A.; Williams, E. C.; Chazarra-Gil , R.; Larraz, M.; Frau, C.; Puengel, T.; Guillot, A.; Rouhani, F. J. et al.; Mahbubani, K.; Godfrey, E.; Davies, S. E.; Athanasiadis, E.; Saeb-Parsy, K.; Tacke, F.; Allison, M.; Mohorianu, I.; Vallier, L.: Acquisition of epithelial plasticity in human chronic liver disease. Nature 630 (8015), S. 166 - 173 (2024)

Oliveira, D.; Assoni, A. F.; Alves, L. M.; Sakugawa, A.; Melo, U. S.; Teles e Silva, A. L.; Sertie, A. L.; Caires, L. C.; Goulart, E.; Ghirotto, B. et al.; Carvalho, V. M.; Ferrari, M. R.; Zatz, M.: ALS-associated VRK1 R321C mutation causes proteostatic imbalance and mitochondrial defects in iPSC-derived motor neurons. Neurobiology of Disease 198, 106540 (2024)

Stötzel, M.; Cheng, C.-Y.; Ilik, I. A.; Sampath Kumar, A.; Akbari-Omgba, P.; van der Weijden, V. A.; Zhang, Y.; Vingron, M.; Meissner, A.; Aktas, T. et al.; Kretzmer, H.; Bulut-Karslioglu, A.: TET activity safeguards pluripotency throughout embryonic dormancy. Nature Structural & Molecular Biology (2024)

Sato, N. S.; Rosa , V. S.; Makhlouf, A.; Kretzmer, H.; Sampath Kumar, A.; Grosswendt, S.; Mattei, A. L.; Courbot, O.; Wolf, S.; Boulanger, J. et al.; Langevin, F.; Wiacek, M.; Karpinski, D.; Elosegui-Artola, A.; Meissner, A.; Zernicka-Goetz , M.; Shahbazi, M. N.: Basal delamination during mouse gastrulation primes pluripotent cells for differentiation. Developmental Cell 59 (10), S. 1252 - 1268 (2024)

Ulicevic, J.; Shao, Z.; Jasnovidova, O.; Bressin, A.; Gajos, M.; Ng, A. H.; Annaldasula, S.; Meierhofer, D.; Church, G. M.; Busskamp, V. et al.; Mayer, A.: Uncovering the dynamics and consequences of RNA isoform changes during neuronal differentiation. Molecular Systems Biology (2024)

Iyer, D. P.; Moyon, L.; Ringeling, F. R.; Cheng, C.-Y.; Wittler, L.; Canzar, S.; Marsico, A.; Bulut-Karslioglu, A.: Combinatorial microRNA activity is essential for the transition of pluripotent cells from proliferation into dormancy. Genome Research 34 (4), S. 589 - 589 (2024)