Publications

Philippar, U.; Schratt, G.; Dieterich, C.; Müller, J. M.; Galgóczy, P.; Engel, F. B.; Keating, M. T.; Gertler, F.; Schüle, R.; Vingron, M. et al.; Nordheim, A.: The SRF target gene Fhl2 antagonizes RhoA/MAL-dependent activation of SRF. Molecular Cell 16 (12), pp. 867 - 880 (2004)

Gupta, S.; Zink, D.; Korn, B.; Vingron, M.; Haas, S. A.: Strengths and weaknesses of EST-based prediction of tissue-specific alternative splicing. BMC Genomics 5, p. 72 - 72 (2004)

Rateitschak, K.; Mueller, T.; Vingron, M.: Annotating significant pairs of transcription factor binding sites in regulatory DNA. Special Issue: Ontology Workshop Tokyo 2003, p. 0040 - 0040 (2004)

Gupta, S.; Zink, D.; Korn, B.; Vingron, M.; Haas, S. A.: Genome wide identification and classification of alternative splicing based on EST data. Bioinformatics 20 (16), pp. 2579 - 2585 (2004)

Crass, T.; Antes, I.; Basekow, R.; Bork, P.; Buning, C.; Christensen, M.; Claußen, H.; Ebeling, C.; Ernst, P.; Gailus-Durner, V. et al.; Glatting, K.-H.; Gohla, R.; Gößling, F.; Grote, K.; Heidtke, K.; Herrmann, A.; O'Keeffe, S.; Kießlich, O.; Kolibal, S.; Korbel, J. O.; Lengauer, T.; Liebich, I.; van der Linden, M.; Luz, H.; Meissner, K.; von Mering, C.; Mevissen, H.-T.; Mewes, H.-W.; Michael, H.; Mokrejs, M.; Müller, T.; Pospisil, H.; Rarey, M.; Reich, J. G.; Schneider, R.; Schomburg, D.; Schulze-Kremer, S.; Schwarzer, K.; Sommer, I.; Springstubbe, S.; Suhai, S.; Thoppae, G.; Vingron, M.; Warfsmann, J.; Werner, T.; Wetzler, D.; Wingender, E.; Zimmer, R.: The Helmholtz Network for Bioinformatics: an integrative web portal for bioinformatics resources. Bioinformatics 20 (2), pp. 268 - 270 (2004)

Hermjakob, H.; Montecchi-Palazzi, L.; Lewington, C.; Mudali, S.; Kerrien, S.; Orchard, S.; Vingron, M.; Roechert, B.; Roepstorff, P.; Valencia, A. et al.; Margalit, H.; Armstrong, J.; Bairoch, A.; Cesareni, G.; Sherman, D.; Apweller, R.: IntAct: an open source molecular interaction database. Nucleic Acids Research 32 (Sp. Iss. SI), pp. D452 - D455 (2004)

von Heydebreck, A.; Sperling, S.; Kaynak, B.; Lehrach, H.; Vingron, M.: Genexpressionsanalyse komplexer klinischer Phänotypen mittels cDNS-Arrays - Gene Expression Profiling of Complex Clinical Phenotypes using cDNA-Arrays. it - Information Technology 46 (1), pp. 26 - 30 (2004)

Xue, Y. T.; Haas, S.; Brino, L.; Gusnanto, A.; Riemers, M.; Talibi, D.; Vingron, M.; Ekwall, K.; Wright, A. P. H.: A DNA microarray for fission yeast: minimal changes in global gene expression after temperature shift. Yeast 21 (1), pp. 25 - 39 (2004)

Klau, G. W.; Rahmann, S.; Schliep, A.; Vingron, M.; Reinert, K.: Optimal robust non-unique probe selection using Integer Linear Programming. Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology, Glasgow, UK, July 31, 2004 - August 04, 2004. Bioinformatics 20 (Suppl.), pp. i186 - i193 (2004)

Dieterich, C.; Rahmann, S.; Vingron, M.: Functional inference from non-random distributions of conserved predicted transcription factor binding sites. Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology, Glasgow, UK, July 31, 2004 - August 04, 2004. Bioinformatics 20 (Suppl.), pp. i109 - i115 (2004)

Huber, W.; von Heydebreck, A.; Vingron, M.: Error models for microarray intensities, (2004)