Publications of A. Kamburov

Hardt, C.; Beber, M. E.; Rasche, A.; Kamburov, A.; Hebels, D. G.; Kleinjans, J. C.; Herwig, R.: ToxDB: pathway-level interpretation of drug-treatment data. Database (Oxford) 2016, baw052 (2016)

Kamburov, A.; Stelzl, U.; Lehrach, H.; Herwig, R.: The ConsensusPathDB interaction database: 2013 update. Nucleic Acids Research (London) 41 (Database issue), pp. D793 - 800 (2013)

Woodsmith, J.; Kamburov, A.; Stelzl, U.: Dual Coordination of Post Translational Modifications in Human Protein Networks. PLoS Computational Biology 9 (3), p. e1002933 - e1002933 (2013)

Kamburov, A.; Grossmann, A.; Herwig, R.; Stelzl, U.: Cluster-based assessment of protein-protein interaction confidence. BMC Bioinformatics, p. 13:262 - 13:262 (2012)

Kamburov, A.; Stelzl, U.; Herwig, R.: IntScore: a web tool for confidence scoring of biological interactions. Nucleic Acids Research (London) 40 (Web Server issue), pp. W140 - W146 (2012)

Dreher, F.; Kreitler, T.; Hardt, C.; Kamburov, A.; Yildirimman, R.; Schellander, K.; Lehrach, H.; Lange, B. M. H.; Herwig, R.: DIPSBC--data integration platform for systems biology collaborations. BMC Bioinformatics 13, 13:85 (2012)

Hegele, A.; Kamburov, A.; Großmann, A.; Sourlis, C.; Wowro, S. J.; Weimann, M.; Will, C. L.; Pena, V.; Lührmann, R.; Stelzel, U.: Dynamic protein-protein interaction wiring of the human spliceosome. Molecular Cell 45 (4), pp. 567 - 580 (2012)

Dreher, F.; Kamburov, A.; Herwig, R.: Construction of a pig physical interactome using sequence homology and a comprehensive reference human interactome. Evolutionary Bioinformatics 8, pp. 119 - 126 (2012)

Cavill, R.; Kamburov, A.; Ellis, J. K.; Athersuch, T. J.; Blagrove, M. S.; Herwig, R.; Ebbels, T. M.; Keun, H. C.: Consensus-phenotype integration of transcriptomic and metabolomic data implies a role for metabolism in the chemosensitivity of tumour cells. PLoS Computational Biology 7 (3), p. e1001113 (2011)

Kamburov, A.; Cavill, R.; Ebbels, T. M.; Herwig, R.; Keun, H. C.: Integrated pathway-level analysis of transcriptomics and metabolomics data with IMPaLA. Bioinformatics 27 (20), pp. 2917 - 8 (2011)

Kamburov, A.; Pentchev, K.; Galicka, H.; Wierling, C.; Lehrach, H.; Herwig, R.: ConsensusPathDB: toward a more complete picture of cell biology. Nucleic Acids Research (London) 39 (Database issue), pp. D712 - D717 (2011)

Yildirimman, R.; Brolen, G.; Vilardell, M.; Eriksson, G.; Synnergren, J.; Gmuender, H.; Kamburov, A.; Ingelman-Sundberg, M.; Castell, J.; Lahoz, A. et al.; Kleinjans, J.; van Delft, J.; Bjorquist, P.; Herwig, R.: Human embryonic stem cell derived hepatocyte-like cells as a tool for in vitro hazard assessment of chemical carcinogenicity. Toxicological Sciences: an Official Journal of the Society of Toxicology 124 (2), pp. 278 - 90 (2011)

Pentchev, K.; Ono, K.; Herwig, R.; Ideker, T.; Kamburov, A.: Evidence mining and novelty assessment of protein-protein interactions with the ConsensusPathDB plugin for Cytoscape. (2010)

Ravasi, T.; Suzuki, H.; Cannistraci, C. V.; Katayama, S.; Bajic, V. B.; Tan, K.; Akalin, A.; Schmeier, S.; Kanamori-Katayama, M.; Bertin, N. et al.; Carninci, P.; Daub, C. O.; Forrest, A. R.; Gough, J.; Grimmond, S.; Han, J. H.; Hashimoto, T.; Hide, W.; Hofmann, O.; Kamburov, A.; Kaur, M.; Kawaji, H.; Kubosaki, A.; Lassmann, T.; van Nimwegen, E.; MacPherson, C. R.; Ogawa, C.; Radovanovic, A.; Schwartz, A.; Teasdale, R. D.; Tegner, J.; Lenhard, B.; Teichmann, S. A.; Arakawa, T.; Ninomiya, N.; Murakami, K.; Tagami, M.; Fukuda, S.; Imamura, K.; Kai, C.; Ishihara, R.; Kitazume, Y.; Kawai, J.; Hume, D. A.; Ideker, T.; Hayashizaki, Y.: An atlas of combinatorial transcriptional regulation in mouse and man. Cell 140 (5), pp. 744 - 752 (2010)

Kamburov, A.; Wierling, C.; Lehrach, H.; Herwig, R.: ConsensusPathDB—a database for integrating human functional interaction networks. Nucleic Acids Research 37 (Database issue), pp. D623 - D628 (2008)

Kamburov, A.; Goldovsky, L.; Freilich, S.; Kapazoglou, A.; Kunin, V.; Enright, A. J.; Tsaftaris, A.; Ouzounis, C. A.: Denoising inferred functional association networks obtained by gene fusion analysis. BMC Genomics 8, p. 460 - 460 (2007)

Kamburov, A.: More complete and more accurate interactomes for elucidating the mechanisms of complex diseases. Dissertation (2012)

Kamburov, A.: ConsensusPathDB - a database for matching pathway annotation for human. Master, Freie Universität, Berlin (2007)