Publications of Edda Klipp

Rubelt, F.; Sievert, V.; Knaust, F.; Diener, C.; Lim, T. S.; Klipp, E.; Reinhardt, R.; Lehrach, H.; Konthur, Z.: Onset of Immune Senescence Defined by Unbiased Pyrosequencing of Human Immunoglobulin mRNA Repertoires. PLoS One (accepted)

Barberis, M.; Linke, C.; Adrover, M. A.; Gonzalez-Novo, A.; Lehrach, H.; Krobitsch, S.; Posas, F.; Klipp, E.: Sic1 plays a role in timing and oscillatory behaviour of B-type cyclins. Biotechnol Adv 30 (1), pp. 108 - 130 (2012)

Mah, N.; Wang, Y.; Liao, M. C.; Prigione, A.; Jozefczuk, J.; Lichtner, B.; Wolfrum, K.; Haltmeier, M.; Flottmann, M.; Schaefer, M. et al.; Hahn, A.; Mrowka, R.; Klipp, E.; Andrade-Navarro, M. A.; Adjaye, J.: Molecular insights into reprogramming-initiation events mediated by the OSKM gene regulatory network. PLoS ONE 6 (8), p. e24351 (2011)

Kühn, C.; Wierling, C.; Kühn, A.; Klipp, E.; Panopoulou, G.; Lehrach, H.; Poustka, A. J.: Monte-Carlo analysis of an ODE Model of the Sea Urchin Endomesoderm Network. BMC Systems Biology 3, p. 83 - 83 (2009)

Herrgård, M. J.; Swainston, N.; Dobson, P.; Dunn, W. B.; Arga, K. Y.; Arvas, M.; Büthgen, N.; Borger, S.; Costenoble, R.; Heinemann, M. et al.; Hucka, M.; Le Novère, N.; Li, P.; Liebermeister, W.; Mo, M. L.; Oliveira, A. P.; Petranovic, D.; Pettifer, S.; Simeonidis, E.; Smallbone, K.; Spasié, I.; Weichart, D.; Brent, R.; Broomhead, D. S.; Westerhoff, H. V.; Kürdar, B.; Penttilä, M.; Klipp, E.; Palsson, B. Ø.; Sauer, U.; Oliver, S. G.; Mendes, P.; Nielsen, J.; Kell, D. B.: A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology. Nature Biotechnology 26 (10), pp. 1155 - 1160 (2008)

Zi, Z.; Zheng, Y.; Rundell, A. E.; Klipp, E.: A systems biology markup language (SBML) based sensitivity analysis tool. BMC Bioinformatics 15 (9), p. 342 - 342 (2008)

Gerber, S.; Aßmus, H.; Bakker, B.; Klipp, E.: Drug-efficacy depends on the inhibitor type and the target position in a metabolic network — a systematic study. Journal of Theoretical Biology 252 (3), pp. 442 - 455 (2008)

Schaber, J.; Klipp, E.: Short-term volume and turgor regulation in yeast. Essays in Biochemisry 45, pp. 147 - 159 (2008)

Ralser, M.; Wamelink, M. M.; Kowald, A.; Gerisch, B.; Heeren, G.; Struys, E. A.; Klipp, E.; Jakobs, C.; Breitenbach, M.; Lehrach, H. et al.; Krobitsch, S.: Dynamic rerouting of the carbohydrate flux is key to counteracting oxidative stress. Journal of Biology 6 (4), p. 10 - 10 (2007)

Klipp, E.: Modelling dynamic processes in yeast. Yeast 24 (11), pp. 943 - 959 (2007)

Zi, Z.; Klipp, E.: Cellular signaling is potentially regulated by cell density in receptor trafficking networks. FEBS Letters 581 (24), pp. 4589 - 4595 (2007)

Zi, Z.; Klipp, E.: Constraint-based modeling and kinetic analysis of the smad dependent TGF-ß signaling pathway. PLoS One 2 (9), p. e936 - e936 (2007)

Klipp, E.; Liebermeister, W.; Helbig, A.; Kowald, A.; Schaber, J.: Systems biology standards—the community speaks. Nature Biotechnology 25 (4), pp. 390 - 391 (2007)

Barberis, M.; Klipp, E.: Insights into the network controlling the G1/S transition in budding yeast. Genome Informatics Series (GIS) 18 (1), pp. 85 - 99 (2007)

Barberis, M.; Klipp, E.; Vanoni, M.; Alberghina, A.: Cell size at S phase initiation: an emergent property of the G1/S network. PLoS Computational Biology 3 (4), p. e64 - e64 (2007)

Borger, S.; Liebermeister, W.; Uhlendorf, J.; Klipp, E.: Automatically generated model of a metabolic network. Genome Informatics Series (GIS) 18 (1), pp. 215 - 224 (2007)

Kühn, C.; Kühn, A.; Poustka, A.; Klipp, E.: Modeling development: spikes of the sea urchin. Genome Informatics 18 (1), pp. 75 - 84 (2007)

Kühn, C.; Kühn, A.; Poustka, A.; Klipp, E.: Modeling development: spikes of the sea urchin. Genome Informatics 18 (1), pp. 75 - 84 (2007)

Ralser, M.; Wamelink, M. M.; Kowald, A.; Gerisch, B.; Heeren, G.; Struys, E. A.; Klipp, E.; Jakobs, C.; Breitenbach, M.; Lehrach, H. et al.; Krobitsch, S.: Dynamic rerouting of the carbohydrate flux is key to counteracting oxidative stress. Journal of Biology 6 (4), p. 10 - 10 (2007)

Zi, Z.; Klipp, E.: Steady state analysis of signal response in receptor trafficking networks. Genome Informatics Series (GIS) 18 (1), pp. 100 - 108 (2007)