Publications of B. Timmermann

Schweiger, M. R.; Kerick, M.; Timmermann, B.; Isau, M.: The power of NGS technologies to delineate the genome organization in cancer: from mutations to structural variations and epigenetic alterations. Cancer Metastasis Reviews 30 (2), pp. 199 - 210 (2011)

Timmermann, B.; Kerick, M.; Roehr, C.; Fischer, A.; Isau, M.; Boerno, S. T.; Wunderlich, A.; Barmeyer, C.; Seemann, P.; Koenig, J. et al.; Lappe, M.; Kuss, A. W.; Garshasbi, M.; Bertram, L.; Trappe, K.; Werber, M.; Herrmann, B. G.; Zatloukal, K.; Lehrach, H.; Schweiger, M. R.: Somatic mutation profiles of MSI and MSS colorectal cancer identified by whole exome next generation sequencing and bioinformatics analysis. PLoS ONE 5 (12), p. e15661 - e15661 (2010)

Kerick, M.; Timmermann, B.; Schweiger, M. R.: High-throughput sequencing of frozen and paraffin-embedded tumor and normal tissue. Pathologe 31 (suppl 2), pp. 255 - 257 (2010)

Chavez, L.; Jozefczuk, J.; Grimm, C.; Dietrich, J.; Timmermann, B.; Lehrach, H.; Herwig, R.; Adjaye, J.: Computational analysis of genome-wide DNA methylation during the differentiation of human embryonic stem cells along the endodermal lineage. Genome Research 20, pp. 1441 - 1450 (2010)

Timmermann, B.; Jarolim, S.; Russmayer, H.; Kerick, M.; Michel, S.; Krüger, A.; Bluemlein, K.; Laun, P.; Grillari, J.; Lehrach, H. et al.; Breitenbach, M.; Ralser, M.: A new dominant peroxiredoxin allele identified by whole-genome re-sequencing of random mutagenized yeast causes oxidant-resistance and premature aging. Aging (Albany NY) 2 (8), pp. 475 - 486 (2010)

Dahl, A.; Mertes, F.; Timmermann, B.; Lehrach, H.: The application of massively parallel sequencing technologies in diagnostics. F1000 Biology Reports 2, p. 2:59 - 2:59 (2010)

Weise, A.; Timmermann, B.; Grabherr, M.; Werber, M.; Heyn, P.; Kosyakova, N.; Liehr, T.; Neitzel, H.; Konrat, K.; Bommer, C. et al.; Dietrich, C.; Rajab, A.; Reinhardt, R.; Mundlos, S.; Lindner, T. H.; Hoffmann, K.: High-throughput sequencing of microdissected chromosomal regions. European Journal of Human Genetics, ejhg.2009.196, pp. 1 - 6 (2009)

Schweiger, M. R.; Kerick, M.; Timmermann, B.; Albrecht, M. W.; Borodina, T.; Parkhomchuk, D.; Zatloukal, K.; Lehrach, H.: Genome-wide massively parallel sequencing of formaldehyde fixed-paraffin embedded (FFPE) tumor tissues for copy-number- and mutation-analysis. PLoS ONE 4 (5), p. e5548 - e5548 (2009)

Ralser, M.; Nebel, A.; Kleindorp, R.; Krobitsch, S.; Lehrach, H.; Schreiber, S.; Reinhardt, R.; Timmermann, B.: Sequencing and genotypic analysis of the triosephosphate isomerase (TPI1) locus in a large sample of long-lived Germans. BMC Genetics 9, p. 9:38 - 9:38 (2008)

Ralser, M.; Nebel, A.; Kleindorp, R.; Krobitsch, S.; Lehrach, H.; Schreiber, S.; Reinhardt, R.; Timmermann, B.: Sequencing and genotypic analysis of the triosephosphate isomerase (TPI1) locus in a large sample of long-lived Germans. BMC Genetics 9, p. 9:38 - 9:38 (2008)

Timmermann, B.; Sauer, S.; Dahl, A.; Reinhardt, R.: Genetische Variabilität des Menschen: Hochdurchsatz- Technologien und Datenanalyse. Laborwelt 5 (5), pp. 31 - 32 (2004)

Timmermann, B.; Sauer, S.; Omran, H.; Sudbrak, R.; Reinhardt, R.: Vergleichende Sequenzierung von Kandidatengenen: die Resequencing-Plattform am MPI-MG. GenomXPress: Informationen aus der Deutschen Genomforschung 2004 (1), pp. 17 - 19 (2004)

Hoehe, M. R.; Timmermann, B.; Lehrach, H.: Human inter-individual DNA sequence variation in candidate genes, drug targets, the importance of haplotypes and pharmacogenomics. Current Pharmaceutical Biotechnology 4 (6), pp. 351 - 378 (2003)

Busjahn, A.; Freier, K.; Faulhaber, H.-D.; Li, G.-H.; Rosenthal, M.; Jordan, J.; Hoehe, M. R.; Timmermann, B.; Luft, F. C.: Beta-2 Adrenergic receptor gene variations and coping styles in twins. Biological Psychology 61 (1 - 2), pp. 97 - 109 (2002)

Hoehe, M. R.; Timmermann, B.; Lehrach, H.: Haplotypen und die systematische Analyse genetischer Variation: Krankheitsgene, „Drug Targets“ und Pharmakogenomik. Proteomics & Drug Development, pp. 478 - 485 (2002)

Despang, A.; Schöpflin, R.; Franke, M.; Ali, S.; Jerkovic, I.; Paliou, C.; Chan, W.-L.; Timmermann, B.; Wittler, L.; Vingron, M. et al.; Mundlos, S.; Ibrahim, D. M.: Functional dissection of TADs reveals non-essential and instructive roles in regulating gene expression, bioRxiv (Preprint Server) 2019, (2019)

Bridavsky, M.; Kuhl, H.; Woodruff, A.; Kornak, U.; Timmermann, B.; Mages, N.; 99 Lives Consortium; Lupiáñez, D. G.; Symmons, O.; Ibrahim, D. M.: Crowdfunded whole-genome sequencing of the celebrity cat Lil BUB identifies causal mutations for her osteopetrosis and polydactyly, bioRxiv (Preprint Server), (2019)

Cova, G.; Glaser, J.; Schöpflin, R.; Ali, S.; Prada-Medina, C. A.; Franke, M.; Falcone, R.; Federer, M.; Ponzi, E.; Ficarella, R. et al.; Novara, F.; Wittler, L.; Timmermann, B.; Gentile, M.; Zuffardi, O.; Spielmann, M.; Mundlos, S.: Combinatorial effects on gene expression at the Lbx1/Fgf8 locus resolve Split-Hand/Foot Malformation type 3. (2023)

Lienhard, M.; van den Beucken, T.; Timmermann, B.; Hochradel, M.; Boerno, S.; Caiment, F.; Vingron, M.; Herwig, R.: Long-read transcriptome sequencing analysis with IsoTools. (2021)

Smajić, S.; Prada-Medina, C. A.; Landoulsi​, Z.; Dietrich, C.; Jarazo, J.; Henck, J.; Balachandran, S.; Pachchek, S.; Morris, C. M.; Antony, P. et al.; Timmermann, B.; Sauer, S.; Schwamborn, J. C.; May, P.; Grünewald, A.; Spielmann, M.: Single-cell sequencing of the human midbrain reveals glial activation and a neuronal state specific to Parkinson’s disease. (2020)