Publications of Richard Reinhardt

Lee, Y. P.; Giorgi, F. M.; Lohse, M.; Kvederaviciute, K.; Klages, S.; Usadel, B.; Meskiene, I.; Reinhardt, R.; Hincha, D. K.: Transcriptome sequencing and microarray design for functional genomics in the extremophile Arabidopsis relative Thellungiella salsuginea (Eutrema salsugineum). BMC Genomics 14, 14:793 (2013)

Rubelt, F.; Sievert, V.; Knaust, F.; Diener, C.; Lim, T. S.; Klipp, E.; Reinhardt, R.; Lehrach, H.; Konthur, Z.: Onset of Immune Senescence Defined by Unbiased Pyrosequencing of Human Immunoglobulin mRNA Repertoires. PLoS One (accepted)

Clark, M. S.; Denekamp, N. Y.; Thorne, M. A.; Reinhardt, R.; Drungowski, M.; Albrecht, M.; Klages, S.; Beck, A.; Kube, M.; Lubzens, E.: Long-term survival of hydrated resting eggs from Brachionus plicatilis. PLoS One 7 (1), p. e29365 - e29365 (2012)

Rubelt, F.; Sievert, V.; Knaust, F.; Diener, C.; Lim, T. S.; Skriner, K.; Klipp, E.; Reinhardt, R.; Lehrach, H.; Konthur, Z.: Onset of immune senescence defined by unbiased pyrosequencing of human immunoglobulin mRNA repertoires. PLoS One 7 (11), e49774 (2012)

Brameier, M.; Herwig, A.; Reinhardt, R.; Walter, L.; Gruber, J.: Human box C/D snoRNAs with miRNA like functions: expanding the range of regulatory RNAs. Nucleic Acids Research 39 (2), pp. 675 - 686 (2011)

Denekamp, N. Y.; Reinhardt, R.; Albrecht, M. W.; Drungowski, M.; Kube, M.; Lubzens, E.: The expression pattern of dormancy-associated genes in multiple life-history stages in the rotifer Brachionus plicatilis. Hydrobiologia 662 (1), pp. 51 - 63 (2011)

Jensen, L. R.; Chen, W.; Moser, B.; Lipkowitz, B.; Schroeder, C.; Musante, L.; Tzschach, A.; Kalscheuer, V. M.; Meloni, I.; Raynaud, M. et al.; van Esch, H.; Chelly, J.; de Brouwer, A. P.; Hackett, A.; van der Haar, S.; Henn, W.; Gecz, J.; Riess, O.; Bonin, M.; Reinhardt, R.; Ropers, H. H.; Kuss, A. W.: Hybridisation-based resequencing of 17 X-linked intellectual disability genes in 135 patients reveals novel mutations in ATRX, SLC6A8 and PQBP1. Eur J Hum Genet 19 (6), pp. 717 - 20 (2011)

Turkmen, S.; Riehn, M.; Klopocki, E.; Molkentin, M.; Reinhardt, R.; Burmeister, T.: A BACH2-BCL2L1 fusion gene resulting from a t(6;20)(q15;q11.2) chromosomal translocation in the lymphoma cell line BLUE-1. Genes Chromosomes Cancer 50 (6), pp. 389 - 96 (2011)

Spanu, P. D.; Abbott, J. C.; Amselem, J.; Burgis, T. A.; Soanes, D. M.; Stüber, K.; Ver Loren van Themaat, E.; Brown, J. K. M.; Butcher, S. A.; Gurr, S. J. et al.; Lebrun, M.-H.; Ridout, C. J.; Schulze-Lefert, P.; Talbot, N. J.; Ahmadinejad, N.; Ametz, C.; Barton, G. R.; Benjdia, M.; Bidzinski, P.; Bindschedler, L. V.; Both, M.; Brewer, M. T.; Cadle-Davidson, L.; Cadle-Davidson, M. M.; Collemare, J.; Cramer, R.; Frenkel, O.; Godfrey, D.; Harriman, J.; Hoede, C.; King, B. C.; Klages, S.; Kleemann, J.; Knoll, D.; Koti, P. S.; Kreplak, J.; López-Ruiz, F. J.; Lu, X.; Maekawa, T.; Mahanil, S.; Micali, C.; Milgroom, M. G.; Montana, G.; Noir, S.; O’Connell, R. J.; Oberhaensli, S.; Parlange, F.; Pedersen, C.; Quesneville, H.; Reinhardt, R.; Rott, M.; Sacristán, S.; Schmidt, S. M.; Schön, M.; Skamnioti, P.; Sommer, H.; Stephens, A.; Takahara, H.; Thordal-Christensen, H.; Vigouroux, M.; Weßling, R.; Wicker, T.; Panstruga, R.: Genome expansion and gene loss in powdery mildew fungi reveal tradeoffs in extreme parasitism. Science 330 (6010), pp. 1543 - 1546 (2010)

Denoeud, F.; Henriet, S.; Mungpakdee, S.; Aury, J. M.; Da Silva, C.; Brinkmann, H.; Mikhaleva, J.; Olsen, L. C.; Jubin, C.; Canestro, C. et al.; Bouquet, J. M.; Danks, G.; Poulain, J.; Campsteijn, C.; Adamski, M.; Cross, I.; Yadetie, F.; Muffato, M.; Louis, A.; Butcher, S.; Tsagkogeorga, G.; Konrad, A.; Singh, S.; Jensen, M. F.; Cong, E. H.; Eikeseth-Otteraa, H.; Noel, B.; Anthouard, V.; Porcel, B. M.; Kachouri-Lafond, R.; Nishino, A.; Ugolini, M.; Chourrout, P.; Nishida, H.; Aasland, R.; Huzurbazar, S.; Westhof, E.; Delsuc, F.; Lehrach, H.; Reinhardt, R.; Weissenbach, J.; Roy, S. W.; Artiguenave, F.; Postlethwait, J. H.; Manak, J. R.; Thompson, E. M.; Jaillon, O.; Du Pasquier, L.; Boudinot, P.; Liberles, D. A.; Volff, J. N.; Philippe, H.; Lenhard, B.; Crollius, H. R.; Wincker, P.; Chourrout, D.: Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate. Science 330 (6009), pp. 1381 - 1385 (2010)

Wagener, A.; Goessling, H. F.; Schmitt, A. O.; Mauel, S.; Gruber, A. D.; Reinhardt, R.; Brockmann, G. A.: Genetic and diet effects on Ppar-α and Ppar-γ signaling pathways in the Berlin Fat Mouse Inbred line with genetic predisposition for obesity. Lipids in Health and Disease 9, p. 9:99 - 9:99 (2010)

Jogler, C.; Niebler, M.; Lin, W.; Kube, M.; Wanner, G.; Kolinko, S.; Stief, P.; Beck, A. J.; De Beer, D.; Petersen, N. et al.; Pan, Y.; Amann, R.; Reinhardt, R.; Schüler, D.: Cultivation-independent characterization of ‘Candidatus Magnetobacterium bavaricum’ via ultrastructural, geochemical, ecological and metagenomic methods. Environmental Microbiology 12 (9), pp. 2466 - 2478 (2010)

Pinto, P. I. S.; Matsumura, H.; Thorne, M. A. S.; Power, D. M.; Terauchi, R.; Reinhardt, R.; Canário, A. V. M.: Gill transcriptome response to changes in environmental calcium in the green spotted puffer fish. BMC Genomics 11, p. 11:476 - 11:476 (2010)

Kube, M.; Migdoll, A. M.; Gehring, I.; Heitmann, K.; Mayer, Y.; Kuhl, H.; Knaust, F.; Geider, K.; Reinhardt, R.: Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae. BMC Genomics 11, p. 11:393 - 11:393 (2010)

Ferraresso, S.; Milan, M.; Pellizzari, C.; Vitulo, N.; Reinhardt, R.; Canario, A. V. M.; Patarnello, T.; Bargelloni, L.: Development of an oligo DNA microarray for the European sea bass and its application to expression profiling of jaw deformity. BMC Genomics 11, p. 11:354 - 11:354 (2010)

Wossidlo, M.; Arand, J.; Sebastiano, V.; Lepikhov, K.; Boiani, M.; Reinhardt, R.; Schöler, H.; Walter, J.: Dynamic link of DNA demethylation, DNA strand breaks and repair in mouse zygotes. EMBO Journal 29 (11), pp. 1877 - 1888 (2010)

Yudkovski, Y.; Glazer, L.; Shechter, A.; Reinhardt, R.; Chalifa-Caspi, V.; Sagi, A.; Tom, M.: Multi-transcript expression patterns in the gastrolith disk and the hypodermis of the crayfish Cherax quadricarinatus at premolt. Comparative Biochemistry and Physiology, Part D: Genomics and Proteomics 5 (2), pp. 171 - 177 (2010)

Rohde, C.; Zhang, Y.; Reinhardt, R.; Jeltsch, A.: BISMA--fast and accurate bisulfite sequencing data analysis of individual clones from unique and repetitive sequences. BMC Bioinformatics 11, p. 11:230 - 11:230 (2010)

Glöckner, J.; Kube, M.; Shrestha, P. M.; Weber, M.; Glöckner, F. O.; Reinhardt, R.; Liesack, W.: Phylogenetic diversity and metagenomics of candidate division OP3. Environmental Microbiology 12 (5), pp. 1218 - 1229 (2010)

Denekamp, N. Y.; Reinhardt, R.; Kube, M.; Lubzens, E.: Presence of late embryogenesis abundant (LEA) proteins in a nondesiccated, diapausing invertebrate embryo (Rotifers). Biology of Reproduction 82 (4), pp. 714 - 724 (2010)