Publications of Hans Lehrach

Parkhomchuk, D.; Borodina, T.; Amstislavskiy, V.; Banaru, M.; Hallen, L.; Krobitsch, S.; Lehrach, H.; Soldatov, A.: Transcriptome analysis by strand-specific sequencing of complementary DNA. Nucleic Acids Research 37 (18), p. e123 - e123 (2009)

Hufton, A. L.; Mathia, S.; Braun, H.; Georgi, U.; Lehrach, H.; Vingron, M.; Poustka, A. J.; Panopoulou, G.: Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention. Genome Resaerch 19, pp. 2036 - 2051 (2009)

Kühn, C.; Wierling, C.; Kühn, A.; Klipp, E.; Panopoulou, G.; Lehrach, H.; Poustka, A. J.: Monte-Carlo analysis of an ODE Model of the Sea Urchin Endomesoderm Network. BMC Systems Biology 3, p. 83 - 83 (2009)

Chavez, L.; Bais, A. S.; Vingron, M.; Lehrach, H.; Adjaye, J.; Herwig, R.: In silico identification of a core regulatory network of OCT4 in human embryonic stem cells using an integrated approach. BMC Genomics 10, p. 314 - 314 (2009)

Ralser, M.; Wamelink, M. M. C.; Latkolik, S.; Jansen, E. E. W.; Lehrach, H.; Jakobs, C.: Correspondence: Metabolic reconfiguration precedes transcriptional regulation in the antioxidant response. Nature biotechnology 27 (7), pp. 604 - 605 (2009)

Schweiger, M. R.; Kerick, M.; Timmermann, B.; Albrecht, M. W.; Borodina, T.; Parkhomchuk, D.; Zatloukal, K.; Lehrach, H.: Genome-wide massively parallel sequencing of formaldehyde fixed-paraffin embedded (FFPE) tumor tissues for copy-number- and mutation-analysis. PLoS ONE 4 (5), p. e5548 - e5548 (2009)

Zerck, A.; Nordhoff, E.; Resemann, A.; Mirgorodskaya, E.; Suckau, D.; Reinert, K.; Lehrach, H.; Gobom, J.: An Iterative Strategy for Precursor Ion Selection for LC-MS/MS Based Shotgun Proteomics. Journal of Proteome Research 8 (7), pp. 3239 - 3251 (2009)

Ralser, M.; Zeidler, U.; Lehrach, H.: Interfering with Glycolysis Causes Sir2-Dependent Hyper-Recombination of Saccharomyces cerevisiae Plasmids. PLoS ONE 4 (4), p. e5376 - e5376 (2009)

Baek, Y.-S.; Haas, S.; Hackstein, H.; Bein, G.; Hernandez-Santana, M.; Lehrach, H.; Sauer, S.; Seitz, H.: Identification of novel transcriptional regulators involved in macrophage differentiation and activation in U937 cells. BMC Immunology 10, p. 18 - 18 (2009)

Bíliková, K.; Mirgorodskaya, E.; Bukovská, G.; Gobom, J.; Lehrach, H.; Imúth, J.: The effect of post-translational modifications on the antimicrobial activity of apalbumin2. Proteomics 9 (8), pp. 2131 - 2138 (2009)

Hache, H.; Lehrach, H.; Herwig, R.: Reverse Engineering of Gene Regulatory Networks: A Comparative Study. EURASIP Journal on Bioinformatics and Systems Biology 2009, ID 617281 (2009)

Hache, H.; Wierling, C.; Lehrach, H.; Herwig, R.: GeNGe: systematic generation of gene regulatory networks. Bioinformatics. Bioinformatics 25 (9), pp. 1205 - 1207 (2009)

Jung, M.; Mollenkopf, H.-J.; Grimm, C.; Wagner, I.; Albrecht, M.; Waller, T.; Pilarsky, C.; Johannsen, M.; Stephan, C.; Lehrach, H. et al.; Nietfeld, W.; Rudel, T.; Jung, K.; Kristiansen, G.: MicroRNA profiling of clear cell renal cell cancer identifies a robust signature to define renal malignancy. Journal of Cellular and Molecular Medicine 13 (9b), pp. 3918 - 3928 (2009)

Kues, W. A.; Sudheer, S.; Herrmann, D.; Carnwath, J. W.; Havlicek, V.; Besenfelder, U.; Lehrach, H.; Adjaye, J.; Niemann, H.: Correction for: Genome-wide expression profiling reveals distinct clusters of transcriptional regulation during bovine preimplantation development in vivo. Proceedings of the National Academy of Sciences of the United States of America 106 (5), p. 1679 - 1679 (2009)

Aebersold, R.; Auffray, C.; Baney, E.; Barillot, E.; Brazma, A.; Brett, C.; Brunak, S.; Butte, A.; Califano, A.; Celis, J. et al.; Čufer, T.; Ferrell, J.; Galas, D.; Gallahan, D.; Gatenby, R.; Goldbeter, A.; Hace, N.; Henney, A.; Hood, L.; Iyengar, R.; Jackson, V.; Kallioniemi, O.; Klingmüller, U.; Kolar, P.; Kolch, W.; Kyriakopoulou, C.; Laplace, F.; Lehrach, H.; Marcus, F.; Matrisian, L.; Nolan, G.; Pelkmans, L.; Potti, A.; Sander, C.; Seljak, M.; Singer, D.; Sorger, P.; Stunnenberg, H.; Superti-Furga, G.; Uhlen, M.; Vidal, M.; Weinstein, J.; Wigle, D.; Williams, M.; Wolkenhauer, O.; Zhivotovsky, B.; Zinovyev, A.; Zupan, B.: Report on EU-USA workshop: how systems biology can advance cancer research. Molecular Oncology 3 (1), pp. 9 - 17 (2009)

Kues, W. A.; Sudheer, S.; Herrmann, D.; Carnwath, J. W.; Havlicek, V.; Besenfelder, U.; Lehrach, H.; Adjaye, J.; Niemann, H.: Genome-wide expression profiling reveals distinct clusters of transcriptional regulation during bovine preimplantation development in vivo. Proceedings of the National Academy of Sciences of the USA 105 (50), pp. 19768 - 19773 (2008)

Regenbrecht, C. R. A.; Wete, Y.; Jodicke, A.; Hugel, R.; Walden, P.; Jung, M.; Lehrach, H.; Adjaye, J.: Molecular characterisation of signalling pathways in cancer stem cells. Ecancermedicalscience 2, p. 115 - 115 (2008)

Greber, B.; Lehrach, H.; Adjaye, J.: Control of early fate decisions in human ES cells by distinct states of TGFβ pathway activity. Stem Cells and Development 17 (6), pp. 1065 - 1077 (2008)

Brink, T. C.; Demetrius, L.; Lehrach, H.; Adjaye, J. A.: Age-related transcriptional changes in gene expression in different organs of mice support the metabolic stability theory of aging. Biogerontology (2008)

Ralser, M.; Wamelink, M. M.; Struys, E. A.; Joppich, C.; Krobitsch, S.; Jakobs, C.; Lehrach, H.: A catabolic block does not sufficiently explain how 2-deoxy-d-glucose inhibits cell growth. Proceedings of the National Academy of Sciences of the United States of America (Washington, DC) 105 (46), pp. 17807 - 17811 (2008)