Publications

The following publications were published exclusively under the affiliation of the Max Planck Society. For publications by the principal investigator outside of the Max Planck Society, see the links on the lower left.

Journal Article (10)

Journal Article
Arndt, P. F.; Vingron, M.: The Otto Warburg International Summer School and Workshop on Networks and Regulation. BMC Bioinformatics 8 (Suppl) (6), p. S1 - S1 (2007)
Journal Article
Zemojtel, T.; Penzkofer, T.; Schultz, J.; Dandekar, T.; Badge, R.; Vingron, M.: Exonization of active mouse L1s: a driver of transcriptome evolution? BMC Genomics 8, p. e392 - e392 (2007)
Journal Article
Grossmann, S.; Bauer, S.; Robinson, P. N.; Vingron, M.: Improved detection of overrepresentation of Gene-Ontology annotations with parent child analysis. Bioinformatics 23 (22), pp. 3024 - 3031 (2007)
Journal Article
Bais, A. S.; Grossmann, S.; Vingron, M.: Incorporating evolution of transcription factor binding sites into annotated alignments. Journal of Bioscience 32 (Suppl. 1), pp. 841 - 850 (2007)
Journal Article
Chung, H.-R.; Kostka, D.; Vingron, M.: A physical model for tiling array analysis. Bioinformatics 23 (13), pp. i80 - i86 (2007)
Journal Article
Messer, P. W.; Bundschuh, R.; Vingron, M.; Arndt, P. F.: Effects of Long-Range Correlations in DNA on Sequence Alignment Score Statistics. Journal of Computational Biology: A Journal of Computational Molecular Cell Biology 14 (5), pp. 655 - 668 (2007)
Journal Article
Bais, A. S.; Grossmann, S.; Vingron, M.: Simultaneous alignment and annotation of cis-regulatory regions. Bioinformatics 23 (2), pp. e44 - e49 (2007)
Journal Article
Roider, H. G.; Kanhere, A.; Manke, T.; Vingron, M.: Predicting transcription factor affinities to DNA from a biophysical model. Bioinformatics 23 (2), pp. 134 - 141 (2007)
Journal Article
Kaluza, P.; Ipsen, M.; Vingron, M.; Mikhailov, A. S.: Design and statistical properties of robust functional networks: A model study of biological signal transduction. Physical Review: E, Statistical, Nonlinear and Soft Matter Physics E75, 015101 (2007)
Journal Article
Dieterich, C.; Franz, M. W.; Vingron, M.: Developments in CORG: a gene-centric comparative genomics resource. Nucleic Acids Research 35 (Database issue), pp. D32 - D35 (2007)

Book Chapter (1)

Book Chapter
Klau, G. W.; Rahmann, S.; Schliep, A.; Vingron, M.; Reinert, K.: Integer linear programming approaches for non-unique probe selection. In: Discrete Mathematics and Data Mining II - DM & DM II, pp. 840 - 856 (Eds. Anthony, M.H.G.; Boros, E.; Hammer, P.L.; Kogan, A.). Elsevier, Amsterdam et al (2007)

Conference Paper (1)

Conference Paper
Klein, H.; Vingron, M.: Using Transcription Factor Binding Site Co-Occurrence to Predict Regulatory Regions. The Seventh Annual International Workshop on Bioinformatics and Systems Biology, Institute of Medical Science, The University of Tokyo, Japan, July 31, 2007 - August 02, 2007. Genome Informatics 18, pp. 109 - 118 (2007)
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