Journal Article (228)
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Journal Article
31 (2), pp. 126 - 34 (2013)
Evaluation of methods for modeling transcription factor sequence specificity. Nature biotechnology 102.
Journal Article
9 (9), p. e1003168 - e1003168 (2013)
Finding Associations among Histone Modifications Using Sparse Partial Correlation Networks. PLoS Computational Biology 103.
Journal Article
488 (7413), pp. 675 - 679 (2012)
T cells become licensed in the lung to enter the central nervous system. Nature 104.
Journal Article
19 (6), pp. 766 - 775 (2012)
R2KS: a novel measure for comparing gene expression based on ranked gene lists. Journal of Computational Biology 105.
Journal Article
28 (8), pp. 1086 - 92 (2012)
Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels. Bioinformatics 106.
Journal Article
3, 40 (2012)
p53 binding sites in transposons. Frontiers in Genetics 107.
Journal Article
19 (2), pp. 255 - 262 (2012)
Predicting the outcome of renal transplantation. Journal of the American Medical Informatics Association 108.
Journal Article
13 Suppl 1, p. S2 - S2 (2012)
Detection of interacting transcription factors in human tissues using predicted DNA binding affinity. BMC Genomics 109.
Journal Article
30 (3), pp. 224 - 226 (2012)
BLUEPRINT to decode the epigenetic signature written in blood. Nature biotechnology 110.
Journal Article
28 (5), pp. 619 - 27 (2012)
Detecting genomic indel variants with exact breakpoints in single- and paired-end sequencing data using SplazerS. Bioinformatics 111.
Journal Article
28 (5), pp. 656 - 63 (2012)
Estimation of pairwise sequence similarity of mammalian enhancers with word neighbourhood counts. Bioinformatics 112.
Journal Article
40 (1), pp. 65 - 74 (2012)
Genome-wide H4 K16 acetylation by SAS-I is deposited independently of transcription and histone exchange. Nucleic Acids Research (London) 113.
Journal Article
28 (7), pp. 1024 - 1025 (2012)
Breakpointer: using local mapping artifacts to support sequence breakpoint discovery from single-end reads. Bioinformatics 114.
Journal Article
20, pp. 104 - 114 (2011)
The KRAB-containing zinc-finger transcriptional regulator ZBRK1 activates SCA2 gene transcription through direct interaction with its gene product, ataxin-2. Human Molecular Genetics 115.
Journal Article
7 (12), e1002304 (2011)
Combinatorial binding in human and mouse embryonic stem cells identifies conserved enhancers active in early embryonic development. PLoS Comput Biol 116.
Journal Article
22 (1), pp. 1 - 11 (2011)
NOA1 is an essential GTPase required for mitochondrial protein synthesis. Molecular Biology of the Cell 117.
Journal Article
473 (2), pp. 139 - 49 (2011)
Genome-wide comparison of cyanobacterial transposable elements, potential genetic diversity indicators. Gene 118.
Journal Article
10 (1) (2011)
Modeling read counts for CNV detection in exome sequencing data. Statistical Applications in Genetics and Molecular Biology 119.
Journal Article
12, p. 624 (2011)
A tandem sequence motif acts as a distance-dependent enhancer in a set of genes involved in translation by binding the proteins NonO and SFPQ. BMC Genomics 120.
Journal Article
6 (1), p. 18 (2011)
DeBi: Discovering Differentially Expressed Biclusters using a Frequent Itemset Approach. Algorithms Mol Biol