List of publications

Journal Article (16)

Journal Article
Hild, M.; Beckmann, B.; Haas, S. A.; Koch, B.; Solovyev, V.; Busold, C.; Fellenberg, K.; Boutros, M.; Vingron, M.; Sauer, F. et al.; Hoheisel, J. D.; Paro, R.: An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome. Genome Biology 5 (1), p. R3 - R3 (2003)
Journal Article
Manke, T.; Bringas, R.; Vingron, M.: Correlating protein-DNA and protein-protein interaction networks. Journal of Molecular Biology 333 (1), pp. 75 - 85 (2003)
Journal Article
Haas, S. A.; Hild, M.; Wright, A. P. H.; Hain, T.; Talibi, D.; Vingron, M.: Genome-scale design of PCR primers and long oligomers for DNA microarrays. Nucleic Acids Research 31 (19), pp. 5576 - 5581 (2003)
Journal Article
Kaynak, B.; von Heydebreck, A.; Mebas, S.; Seelow, D.; Vogel, J.; Sperling, H.-P.; Pregla, R.; Alexi-Meskishvili, V.; Hetzer, R.; Lange, P. E. et al.; Vingron, M.; Lehrach, H.; Sperling, S.: A genome-wide transcriptional fingerprint of normal and malformed human hearts. Circulation 107, pp. 2467 - 2474 (2003)
Journal Article
Beißbarth, T.; Borisevich, I.; Hörlein, A.; Kenzelmann, M.; Hergenhahn, M.; Klewe-Nebenius, A.; Klären, R.; Korn, B.; Schmid, W.; Vingron, M. et al.; Schütz, G.: Analysis of CREM-dependent gene expression during mouse spermatogenesis. Molecular and Cellular Endocrinology 212 (1-2), pp. 29 - 39 (2003)
Journal Article
Schmidt, H. A.; Petzold, E.; Vingron, M.; von Haeseler, A.: Molecular phylogenetics: parallelized parameter estimation and quartet puzzling. Special Issue on High-Performance Computational Biology, pp. 719 - 727 (2003)
Journal Article
Dieterich, C.; Herwig, R.; Vingron, M.: Exploring potential target genes of signaling pathways by predicting conserved transcription factor binding sites. Bioinformatics 19 (Suppl. 2), pp. ii50 - ii56 (2003)
Journal Article
Panopoulou, G.; Hennig, S.; Groth, D.; Krause, A.; Poustka, A. J.; Herwig, R.; Vingron, M.; Lehrach, H.: New evidence for genome-wide duplications at the origin of vertebrates using an amphioxus gene set and completed animal genomes. Genome Research 13 (6), pp. 1056 - 1066 (2003)
Journal Article
Kaynak, B.; von Heydebreck, A.; Mebus, S.; Seelow, D.; Hennig, S.; Vogel, J.; Sperling, H.-P.; Pregla, R.; Alexi-Meskishvili, V.; Hetzer, R. et al.; Lange, P. E.; Vingron, M.; Lehrach, H.; Sperling, S.: Genome-wide array analysis of normal and malformed human hearts. Circulation 107 (19), pp. 2467 - 2474 (2003)
Journal Article
Huber, W.; von Heydebreck, A.; Sültmann, H.; Poustka, A.; Vingron, M.: Parameter estimation for the calibration and variance stabilization of microarray data. Statistical Applications in Genetics and Molecular Biology 2 (1), p. article 3 - article 3 (2003)
Journal Article
Schwikowski, B.; Vingron, M.: Weighted sequence graphs: boosting iterated dynamic programming using locally suboptimal solutions. Discrete Applied Mathematics 127 (1), pp. 95 - 117 (2003)
Journal Article
Kriventseva, E. V.; Koch, I.; Apweiler, R.; Vingron, M.; Bork, P.; Gelfand, M. S.; Sunyaev, S.: Increase of functional diversity by alternative splicing. Trends in Genetics 19 (3), pp. 124 - 128 (2003)
Journal Article
Wieczorek, G.; Steinhoff, C.; Schulz, R.; Scheller, M.; Vingron, M.; Ropers, H. H.; Nuber, U. A.: Gene expression profile of mouse bone marrow stromal cells determined by cDNA microarray analysis. European Journal of Cell Biology 82 (Suppl. 53), p. 41 - 41 (2003)
Journal Article
Dieterich, C.; Wang, H.; Rateitschak, K.; Luz, H.; Vingron, M.: CORG: a database for COmparative Regulatory Genomics. Nucleic Acids Research 31 (1), pp. 55 - 57 (2003)
Journal Article
Markowetz, F.; Edler, L.; Vingron, M.: Support vector machines for protein fold class prediction. Biometrical Journal 45 (3), pp. 377 - 389 (2003)
Journal Article
Rahmann, S.; Müller, T.; Vingron, M.: On the power of profiles for transcription factor binding site detection. Statistical Applications in Genetics and Molecular Biology 2 (1), p. article 7 - article 7 (2003)

Book Chapter (2)

Book Chapter
Huber, W.; Heydebreck, A. v.; Vingron, M.: Analysis of microarray gene expression data. In: Handbook of Statistical Genetics, p. / - / (Eds. Balding, D. J.; Bishop, M.; Cannings, C.). John Wiley & Sons, Ltd, Chichester [et al] (2003)
Book Chapter
Fellenberg, K.; Vingron, M.; Hauser, N. C.; Hoheisel, J. D.: Correspondence analysis with microarray data. In: Perspectives in gene expression, pp. 307 - 343 (Ed. Appasani, K.). Eaton Publishing, Westborough, MA (2003)

Proceedings (1)

Gaussian mixture density estimation applied to microarray data (Lecture Notes in Computer Sciences, 2810). 5th International Symposium on Intelligent Data Analysis, IDA 2003, Berlin, Germany, August 28, 2003 - August 30, 2003. Springer, Berlin [et al] (2003), 624 pp pp.

Conference Paper (1)

Conference Paper
Meinel, T.; Vingron, M.; Krause, A.: The SYSTERS protein family database: taxon-related protein family size distributions and singleton frequencies. In: Proceedings of the German Conference on Bioinformatics (GCB '03), pp. 103 - 108 (Eds. Mewes, H.-W.; Frishman, D.; Heun, V.; Kramer, S.). German Conference on Bioinformatics, Neuherberg/Garching near Munich, October 12, 2003 - October 14, 2003. (2003)
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