Journal Article (1248)

121.
Journal Article
Pan, C.; Reinert, K.: A simple refined DNA minimizer operator enables 2-fold faster computation. Bioinformatics 40 (2), Article btae045 (2024)
122.
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Schulz, E. G.: BREACHing new grounds in fragile X syndrome: Trinucleotide expansion linked to genome-wide heterochromatin domains and genome misfolding. Molecular Cell 84 (3), pp. 413 - 414 (2024)
123.
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Shi, D.; Feng, W.; Zi, Z.: Machine learning unveils RNA polymerase II binding as a predictor for SMAD2-dependent transcription dynamics in response to Actvin signalling. IET Systems Biology 18 (1), pp. 14 - 22 (2024)
124.
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van der Weijden, V. A.; Stötzel, M.; Iyer, D. P.; Fauler, B.; Gralinska, E.; Shahraz, M.; Meierhofer, D.; Vingron, M.; Rulands, S.; Alexandrov, T. et al.; Mielke, T.; Bulut-Karslioglu, A.: FOXO1-mediated lipid metabolism maintains mammalian embryos in dormancy. Nature Cell Biology 26 (2), pp. 181 - 193 (2024)
125.
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Loske, J.; Völler , M.; Lukassen, S.; Stahl, M.; Thürmann, L.; Seegebarth, A.; Röhmel, J.; Wisniewski, S.; Lorenz, S.; Klages, S. et al.; Messingschlager, M.; Eils, R.; Lehmann, I.; Mall , M. A.; Graeber, S. Y.; Trump, S.: Pharmacological Improvement of CFTR Function Rescues Airway Epithelial Homeostasis and Host Defense in Children with Cystic Fibrosis. American Journal of Respiratory and Critical Care Medicine 209 (11), pp. 1338 - 1350 (2024)
126.
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Besiridou, E.; Bhatt, O.; Yurukova, A.; Sahu, A.; Kinkley, S.; Fischer, V.; Triviai, I.: Persistent hypersplenism following successful hematopoietic stem cell transplantation: unraveling the cellular components of extramedullary residual disease and donor hematopoiesis—a case report. Frontiers in Hematology 2, Article 1328503 (2024)
127.
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Afflerbach, A.-K.; Rohrandt, C.; Brändl, B.; Sönksen, M.; Hench, J.; Frank, S.; Börnigen, D.; Alawi, M.; Mynarek, M.; Winkler, B. et al.; Ricklefs, F.; Synowitz, M.; Dührsen, L.; Rutkowski, S.; Wefers, A. K.; Müller, F.-J.; Schoof, M.; Schüller, U.: Classification of Brain Tumors by Nanopore Sequencing of Cell-Free DNA from Cerebrospinal Fluid. Clinical Chemistry 70 (1), pp. 250 - 260 (2024)
128.
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Bulut-Karslioglu, A.: The double-edged sword of bivalency. Nature Reviews Molecular Cell Biology 25 (1), Article 6 (2024)
129.
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Carmona, E. G.; Callejas-Rubio, J. L.; Raya, E.; Ríos-Fernández, R.; Villanueva-Martín, G.; Cid, M. C.; Hernández-Rodríguez, J.; Ballestar, E.; Timmermann, B.; Ortego-Centeno, N. et al.; Martín, J.; Márquez, A.: Single-cell transcriptomic profiling reveals a pathogenic role of cytotoxic CD4+ T cells in giant cell arteritis. Journal of Autoimmunity 142, Article 103124 (2024)
130.
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Schimunek, J.; Seidl, P.; Elez, K.; Hempel, T. ....; Hermans, T. M. ..: A community effort in SARS-CoV-2 drug discovery. Molecular Informatics: Models, Molecules, Systems 43 (1), Article e202300262 (2024)
131.
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Szyrwiel, L.; Gille, C.; Mülleder , M.; Demichev, V.; Ralser, M.: Fast proteomics with dia-PASEF and analytical flow-rate chromatography. Proteomics 24 (1-2), e2300100 (2024)
132.
Journal Article
Zhou, W.; Fischer, A.; Ogwang, M. D.; Luo, W.; Kerchan, P.; Reynolds, S. J.; Tenge, C. N.; Were, P. A.; Kuremu, R. T.; Wekesa, W. N. et al.; Masalu, N.; Kawira, E.; Kinyera, T.; Otim, I.; Legason, I. D.; Nabalende, H.; Ayers, L. W.; Bhatia, K.; Goedert, J. J.; Gouveia, M. H.; Cole, N.; Hicks, B.; Jones, K.; Hummel, M.; Schlesner, M.; Chagaluka, G.; Mutalima, N.; Borgstein, E.; Liomba, G. N.; Kamiza, S.; Mkandawire, N.; Mitambo, C.; Molyneux, E. M.; Newton, R.; Glaser, S.; Kretzmer, H.; Manning, M.; Hutchinson, A.; Hsing, A. W.; Tettey, Y.; Adjei, A. A.; Chanock, S. J.; Siebert, R.; Yeager, M.; Prokunina-Olsson, L.; Machiela, M. J.; Mbulaiteye, S. M.: Mosaic chromosomal alterations in peripheral blood leukocytes of children in sub-Saharan Africa. Nature Communications 14 (1), 8081 (2023)
133.
Journal Article
Basu, S.; Martínez-Cristóbal, P.; Frigolé-Vivas, M.; Pesarrodona, M.; Lewis, M.; Szulc, E.; Bañuelos, C. A.; Sánchez-Zarzalejo, C.; Bielskutė, S.; Zhu, J. et al.; Pombo-García, K.; Garcia-Cabau, C.; Zodi, L.; Dockx, H.; Smak, J.; Kaur, H.; Batlle, C.; Mateos, B.; Biesaga, M.; Escobedo, A.; Bardia, L.; Verdaguer, X.; Ruffoni, A.; Mawji, N. R.; Wang, J.; Obst, J. K.; Tam, T.; Brun-Heath, I.; Ventura, S.; Meierhofer, D.; García, J.; Robustelli, P.; Stracker, T. H.; Sadar, M. D.; Riera, A.; Hnisz, D.; Salvatella, X.: Rational optimization of a transcription factor activation domain inhibitor. Nature Structural & Molecular Biology 30 (12), pp. 1958 - 1969 (2023)
134.
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Kost, C.; Patil, K. R.; Friedman, J.; Garcia, S. L.; Ralser, M.: Metabolic exchanges are ubiquitous in natural microbial communities. Nature Microbiology 8 (12), pp. 2244 - 2252 (2023)
135.
Journal Article
Courraud, J.; Engel, C.; Quartier, A.; Drouot, N.; Houessou, U.; Plassard, D.; Sorlin, A.; Brischoux-Boucher, E.; Gouy, E.; Van Maldergem, L. et al.; Rossi, M.; Lesca, G.; Edery, P.; Putoux, A.; Bilan, F.; Gilbert-Dussardier, B.; Atallah, I.; Kalscheuer, V. M.; Mandel, J.-L.; Piton, A.: Molecular consequences of PQBP1 deficiency, involved in the X-linked Renpenning syndrome. Molecular Psychiatry 29 (2), pp. 287 - 296 (2023)
136.
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Huang, X.; Henck, J.; Qiu, C.; Sreenivasan, V. K. A.; Balachandran, S.; Amarie, O. V.; de Angelis, M. H.; Behncke, R. Y.; Chan, W.-L.; Despang, A. et al.; Dickel, D. E.; Duran, M.; Feuchtinger, A.; Fuchs, H.; Gailus-Durner, V.; Haag, N.; Hägerling, R.; Hansmeier, N.; Hennig, F.; Marshall, C.; Rajderkar, S.; Ringel, A.; Robson, M. I.; Saunders, L. M.; da Silva-Buttkus, P.; Spielmann, N.; Srivatsan, S. R.; Ulferts, S.; Wittler, L.; Zhu, Y.; Kalscheuer, V. M.; Ibrahim, D. M.; Kurth, I.; Kornak, U.; Visel, A.; Pennacchio, L. A.; Beier, D. R.; Trapnell, C.; Cao, J.; Shendure, J.; Spielmann, M.: Single-cell, whole-embryo phenotyping of mammalian developmental disorders. Nature 623 (7988), pp. 772 - 781 (2023)
137.
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Kouroukli, A. G.; Rajaram, N.; Bashtrykov, P.; Kretzmer, H.; Siebert, R.; Jeltsch, A.; Bens, S.: Targeting oncogenic TERT promoter variants by allele-specific epigenome editing. Clinical Epigenetics 15 (1), 183 (2023)
138.
Journal Article
Schifferl, D.; Scholze-Wittler, M.; Villaronga Luque, A.; Pustet , M.; Wittler, L.; Veenvliet, J. V.; Koch, F.; Herrmann, B. G.: Genome-wide identification of notochord enhancers comprising the regulatory landscape of the Brachyury (T) locus in mouse. Development 150 (22), dev202111 (2023)
139.
Journal Article
Klever, M.-K.; Sträng , E.; Hetzel, S.; Jungnitsch, J.; Dolnik, A.; Schöpflin, R.; Schrezenmeier, J.-F.; Schick, F.; Blau, O.; Westermann, J. et al.; Rücker , F. G. ..; Xia, Z.; Döhner, K.; Schrezenmeier, H.; Spielmann, M.; Meissner, A.; Melo, U. S.; Mundlos, S.; Bullinger, L.: AML with complex karyotype: extreme genomic complexity revealed by combined long-read sequencing and Hi-C technology. Blood Advances 7 (21), pp. 6520 - 6531 (2023)
140.
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Rapakoulia, T.; Lopez Ruiz de Vargas, S.; Akbari-Omgba, P.; Laupert, V.; Ulitsky, I.; Vingron, M.: CENTRE: a gradient boosting algorithm for Cell-type-specific ENhancer-Target pREdiction. Bioinformatics 39 (11), btad687 (2023)
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