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Wasinee Rungsarityotin
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Algorithms to Identify Protein Complexes from High-Throughput Data
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Jun 2007
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Philipp Messer
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Tandem Duplications in the Human Genome
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Feb 2008
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Zhike Zi
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Mathematical Modeling and Kinetic Analysis of Cellular Signaling Pathways
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Apr 2008
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Markus Bauer
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A Combinatorial Approach to RNA Sequence-Structure Alignments
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Apr 2008
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|
Utz J. Pape
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Statistics for Transcription Factor Binding Sites
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Jul 2008
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Ole Schulz-Trieglaff
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Computational Methods for Quantitative Peptide Mass Spectrometry
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Oct 2008
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Evelyn Dittmer
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Hidden Markov Models with Time-Continuous Output Behavior
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Nov 2008
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Andrea Weiße
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Global Sensitivity Analysis of Ordinary Differential Equations
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Apr 2009
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Tobias Rausch
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Dissecting Multiple Sequence Alignment Methods
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Sep 2009
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Federico Squartini
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Stationarity and Reversibility in the Nucleotide Evolutionary Process
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Mar 2010
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Ben-Fillippo Krippendorff
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Integrating Cell-level Kinetic Modeling into the Optimization of Cancer Therapeutics
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Apr 2010
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Paz Polak
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Discovering Mutational Patterns in Mammals Using Comparative Genomics
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Jun 2010
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Marcel Schulz
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Data Structures and Algorithms for Analysis of Alternative Splicing with RNA-seq Data
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Jul 2010
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|
Ewa Szczurek
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Modelling Signal Transduction Pathways and Their Transcriptional Response
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Oct 2010
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|
Sayed-Amir Marashi
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Constraint-based Analysis of Substructures of Metabolic Networks
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Apr 2011
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|
Atanas Kamburov
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More Accurate Interactomes for Elucidating the Mechanisms of Complex Diseases
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Aug 2011
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Henning Stehr
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Graph-based Approaches to Protein Structure- and Function Prediction
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May 2011
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Akdes Serin
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Biclustering Analysis for Large Scale Data
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Sep 2011
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|
Rosa Karlić
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Influence of Histone Modifications on mRNA Abundance and Structure
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Sep 2011
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|
Martin Held
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Novel Concepts to Study Conformation and Association Dynamics of Biomolecules
|
Jan 2012
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|
Jonathan Göke
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Analysis of Long-Distance Gene Regulatory Elements
|
May 2012
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|
Martina Fröhlich
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Computational and Experimental Investigation of the Mechanisms Involved in Cellular Water Transport and (Cat)ion Homeostasis
|
May 2012
|
|
Chris Bielow
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Quantication and Simulation of Liquid Chromatography-Mass Spectrometry Data
|
Jun 2012
|
|
Yves Clément
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The Evolution of Base Composition in Mammalian Genomes
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Aug 2012
|
|
Christian Diener
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Localized Signaling and Communication during Yeast Mating
|
Sep 2012
|
|
Marvin Schulz
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Identification of Potential Drug Targets in Kinetic Networks Described by Ordinary Differential Equations
|
Sep 2012
|
|
Anne-Katrin Emde
|
Next-Generation Sequencing Algorithms: From Read Mapping to Variant Detection
|
Nov 2012
|
|
Michael Love
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Statistical Analysis of High-Throughput Sequencing Count Data
|
Jun 2013
|
|
Stephan Aiche
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Inferring Proteolytic Processes from Mass Spectrometry Time Series Data
|
May 2013
|
|
Birte Kehr
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Contributions to Computing and Modeling Multiple Whole-Genome Alignments
|
Nov 2013
|
|
Arne Reimers
|
Metabolic Networks, Thermodynamic Constraints, and Matroid Theory
|
Jun 2014
|
|
Johannes Schöneberg
|
Reaction-Diffusion Dynamics in Biological Systems
|
Jul 2014
|
|
Sharon Hüffner
|
Modularity in Biological Networks
|
Apr 2014
|
|
Sandro Andreotti
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Linear Programming and Integer Linear Programming in Bioinformatics
|
Sep 2014
|
|
Alena van Bömmel
|
Prediction of transcription factor co-occurrence using rank based statistics
|
Jul 2014
|
|
Enrico Siragusa
|
Approximate string matching for high-throughput sequencing
|
May 2015
|
|
Juliane Perner
|
Bioinformatic Approaches for Understanding Chromatin Regulation
|
Jun 2015
|
|
Han Cheng Lie
|
On a strongly convex approximation of a stochastic optimal control problem for importance sampling of metastable diffusions
|
Sep 2015
|
|
Alessandro Mammana
|
Patterns and algorithms in high-throughput sequencing count data
|
Sep 2015
|
|
Xintian You
|
Tailored Analysis in Studying Transcriptome Landscape
|
Sep 2015
|
|
Iliusi Vega del Valle
|
Reconstruction and analysis of the state space for the identification of dynamical states in real-world time series
|
Jan 2016
|
|
Wolfgang Kopp
|
Statistical methods for motif hit enrichment in DNA sequences
|
Oct 2016
|
|
Johannes Helmuth
|
Robust normalization of next generation sequencing data
|
Feb 2017
|
|
Kirsten Thobe
|
Logical modeling of uncertainty in signaling pathways of cancer systems
|
Mar 2017
|
|
Matthias Lienhard
|
Computational analysis of genome-wide methylation enrichment experiments
|
Mar 2017
|
|
Alexandra Reimers
|
Understanding metabolic regulation and cellular resource allocation through optimization
|
Aug 2017
|
|
Matthew Huska
|
Using machine learning to predict and better understand DNA methylation and genomic enhancers
|
Aug 2017
|
|
Sven-Leon Kuchenbecker
|
Analysis of Antigen Receptor Repertoires Captured by High Throughput Sequencing
|
Jan 2018
|
|
Christoph Gorgulla
|
Free Energy Methods Involving Quantum Physics, Path Integrals, and Virtual Screenings: Development, Implementation and Application in Drug Discovery
|
Apr 2018
|
|
Evgenia Youett
|
Adaptive Multilevel Monte Carlo Methods for Random Elliptic Problems
|
Jun 2018
|
|
Mohammadhossein Moeinzadeh
|
De novo and haplotype assembly of polyploid genomes
|
Aug 2018
|
|
Christopher M. Pockrandt
|
Approximate String Matching - Improving Data Structures and Algorithms
|
Feb 2019
|
|
Temesgen Hailemariam Dadi
|
Whole Genome Shotgun Sequencing Based Taxonomic Profiling Methods for Comparative Study of Microbial Communities
|
Jan 2019
|
|
Anna Ramisch
|
Enhancer Prediction Based on Epigenomic Data
|
Feb 2019
|
|
Sabrina Krakau
|
Statistical models to capture protein-RNA interaction footprints from truncation-based CLIP-seq data
|
Jan 2019
|
|
Luigi Sbailò
|
Efficient multi-scale sampling methods in statistical physics
|
Sep 2019
|
|
Hongqing Han
|
Towards accurate and efficient live cell imaging data analysis
|
Dec 2019
|
|
Stefan Budach
|
Explainable Deep Learning Models for Biological Sequence Classification
|
Dec 2019
|
|
Lisa Barros de Andrade e Sousa
|
Using interpretable machine learning to understand gene silencing dynamics during X-chromosome inactivation
|
Jan 2020
|
|
Tobias Zehnder
|
Computational approaches for the prediction of gene regulatory elements and the analysis of their evolutionary conservation
|
Sep 2020
|
|
David Heller
|
Structural variant calling using third-generation sequencing data
|
Sep 2020
|
|
Gal Barel
|
Network propagation with node core for genotype-phenotype associations and module identification
|
Sep 2020
|
|
Roman Schulte-Sasse
|
Integration of multi-omics data with graph convolutional networks to identify cancer-associated genes
|
Dec 2020
|
|
Melissa Bothe
|
Investigating the genomic effects of glucocorticoid receptor activation - an analysis of transcriptional memory and mechanisms that direct divergent genomic occupancy of related transcription factors
|
Mar 2021
|
|
Vı́ctor Mireles Chávez
|
Finding Reusable Modules Using Sparse Matrix Decompositions
|
July 2021
|
|
Martyna Gajos
|
Analysis of the determinants of Pol II pausing
|
Feb 2022
|
|
Elzbieta Gralinska
|
Association Plots visualize cluster-specific genes from high-dimensional transcriptomics data
|
April 2022
|
|
Eldar Abdullaev
|
Dynamical Aspects of the Evolution of Segmental Duplications in the Human Genome
|
April 2022
|
|
Lam-Ha Ly
|
Deciphering cellular heterogeneity by single-cell transcriptome analysis
|
April 2022
|
|
Philip Kleinert
|
Computational interpretation of disease-causing, structural, and non-coding human genetic variants
|
June 2022
|
|
Annkatrin Bressin
|
A Multi-Omics Analysis of Transcription Control by BRD4
|
May 2022
|
|
Shroddha Bose
|
The effect of a gain-of-function mutation in the Cl-/H+ exchanger ClC-7 in lysosomal and mitochondrial morphology and function
|
June 2022
|
|
Shaon Basu
|
Genetic and chemical hydrophobic modification of transcription factor condensates in human disease
|
September 2022
|
|
Jörg Winkler
|
Algorithms for finding RNA sequence-structure motifs
|
September 2022
|
|
Laura Cifuentes Fontanals
|
Methods for control strategy identification in Boolean networks
|
October 2022
|
|
Natalia López Anguita
|
Impact of hypoxia on embryonic and extraembryonic stem cells and during differentiation via gastruloid formation
|
November 2022
|
|
Amèlia Aragonés Hernández
|
Identification of Protogenin as a novel surface marker for early cortical neural stem cells
|
December 2022
|
|
Daniel Rosebrock
|
Dissecting regional heterogeneity and modeling transcriptional cascades in brain organoids
|
December 2022
|
|
Bruna Los
|
Body temperature-controlled antiviral response and SARS-CoV-2 replication
|
April 2023
|
|
Sara Hetzel
|
Investigation of DNA methylation heterogeneity in cancer
|
June 2023
|
|
Melania Nowicka
|
Design and multi-criteria optimization of cell classifier circuits in cancer therapy
|
June 2023
|
|
Paul-Lennard Mendez
|
Mechano-sensitivity of vascular BMP signaling - Insights into Fluid Shear Stress modulations from ligand to chromatin
|
July 2023
|
|
Mitra Darja Darvish
|
Utilizing alignment-free methods to enable quantitative gene expression analysis of large collections of sequencing data
|
August 2023
|