1
|
Wasinee Rungsarityotin
|
CBSC
|
Algorithms to Identify Protein Complexes from High-Throughput Data
|
Jun 2007
|
2
|
Philipp Messer
|
CBSC
|
Tandem Duplications in the Human Genome
|
Feb 2008
|
3
|
Zhike Zi
|
CBSC
|
Mathematical Modeling and Kinetic Analysis of Cellular Signaling Pathways
|
Apr 2008
|
4
|
Markus Bauer
|
CBSC
|
A Combinatorial Approach to RNA Sequence-Structure Alignments
|
Apr 2008
|
5
|
Utz J. Pape
|
CBSC
|
Statistics for Transcription Factor Binding Sites
|
Jul 2008
|
6
|
Ole Schulz-Trieglaff
|
CBSC
|
Computational Methods for Quantitative Peptide Mass Spectrometry
|
Oct 2008
|
7
|
Evelyn Dittmer
|
CBSC
|
Hidden Markov Models with Time-Continuous Output Behavior
|
Nov 2008
|
8
|
Andrea Weiße
|
CBSC
|
Global Sensitivity Analysis of Ordinary Differential Equations
|
Apr 2009
|
9
|
Tobias Rausch
|
CBSC
|
Dissecting Multiple Sequence Alignment Methods
|
Sep 2009
|
10
|
Federico Squartini
|
CBSC
|
Stationarity and Reversibility in the Nucleotide Evolutionary Process
|
Mar 2010
|
11
|
Ben-Fillippo Krippendorff
|
CBSC
|
Integrating Cell-level Kinetic Modeling into the Optimization of Cancer Therapeutics
|
Apr 2010
|
12
|
Paz Polak
|
CBSC
|
Discovering Mutational Patterns in Mammals Using Comparative Genomics
|
Jun 2010
|
13
|
Marcel Schulz
|
CBSC
|
Data Structures and Algorithms for Analysis of Alternative Splicing with RNA-seq Data
|
Jul 2010
|
14
|
Ewa Szczurek
|
CBSC
|
Modelling Signal Transduction Pathways and Their Transcriptional Response
|
Oct 2010
|
15
|
Sayed-Amir Marashi
|
CBSC
|
Constraint-based Analysis of Substructures of Metabolic Networks
|
Apr 2011
|
16
|
Atanas Kamburov
|
CBSC
|
More Accurate Interactomes for Elucidating the Mechanisms of Complex Diseases
|
Aug 2011
|
17
|
Henning Stehr
|
CBSC
|
Graph-based Approaches to Protein Structure- and Function Prediction
|
May 2011
|
18
|
Akdes Serin
|
CBSC
|
Biclustering Analysis for Large Scale Data
|
Sep 2011
|
19
|
Rosa Karlić
|
CBSC
|
Influence of Histone Modifications on mRNA Abundance and Structure
|
Sep 2011
|
20
|
Martin Held
|
CBSC
|
Novel Concepts to Study Conformation and Association Dynamics of Biomolecules
|
Jan 2012
|
21
|
Jonathan Göke
|
CBSC
|
Analysis of Long-Distance Gene Regulatory Elements
|
May 2012
|
22
|
Martina Fröhlich
|
CBSC
|
Computational and Experimental Investigation of the Mechanisms Involved in Cellular Water Transport and (Cat)ion Homeostasis
|
May 2012
|
23
|
Chris Bielow
|
CBSC
|
Quantication and Simulation of Liquid Chromatography-Mass Spectrometry Data
|
Jun 2012
|
24
|
Yves Clément
|
CBSC
|
The Evolution of Base Composition in Mammalian Genomes
|
Aug 2012
|
25
|
Christian Diener
|
CBSC
|
Localized Signaling and Communication during Yeast Mating
|
Sep 2012
|
26
|
Marvin Schulz
|
CBSC
|
Identification of Potential Drug Targets in Kinetic Networks Described by Ordinary Differential Equations
|
Sep 2012
|
27
|
Anne-Katrin Emde
|
CBSC
|
Next-Generation Sequencing Algorithms: From Read Mapping to Variant Detection
|
Nov 2012
|
28
|
Michael Love
|
CBSC
|
Statistical Analysis of High-Throughput Sequencing Count Data
|
Jun 2013
|
29
|
Stephan Aiche
|
CBSC
|
Inferring Proteolytic Processes from Mass Spectrometry Time Series Data
|
May 2013
|
30
|
Birte Kehr
|
CBSC
|
Contributions to Computing and Modeling Multiple Whole-Genome Alignments
|
Nov 2013
|
31
|
Arne Reimers
|
CBSC
|
Metabolic Networks, Thermodynamic Constraints, and Matroid Theory
|
Jun 2014
|
32
|
Johannes Schöneberg
|
CBSC
|
Reaction-Diffusion Dynamics in Biological Systems
|
Jul 2014
|
33
|
Sharon Hüffner
|
CBSC
|
Modularity in Biological Networks
|
Apr 2014
|
34
|
Sandro Andreotti
|
CBSC
|
Linear Programming and Integer Linear Programming in Bioinformatics
|
Sep 2014
|
35
|
Alena van Bömmel
|
CBSC
|
Prediction of transcription factor co-occurrence using rank based statistics
|
Jul 2014
|
36
|
Enrico Siragusa
|
CBSC
|
Approximate string matching for high-throughput sequencing
|
May 2015
|
37
|
Juliane Perner
|
CBSC
|
Bioinformatic Approaches for Understanding Chromatin Regulation
|
Jun 2015
|
38
|
Han Cheng Lie
|
CBSC
|
On a strongly convex approximation of a stochastic optimal control problem for importance sampling of metastable diffusions
|
Sep 2015
|
39
|
Alessandro Mammana
|
CBSC
|
Patterns and algorithms in high-throughput sequencing count data
|
Sep 2015
|
40
|
Xintian You
|
CBSC
|
Tailored Analysis in Studying Transcriptome Landscape
|
Sep 2015
|
41
|
Iliusi Vega del Valle
|
CBSC
|
Reconstruction and analysis of the state space for the identification of dynamical states in real-world time series
|
Jan 2016
|
42
|
Wolfgang Kopp
|
CBSC
|
Statistical methods for motif hit enrichment in DNA sequences
|
Oct 2016
|
43
|
Johannes Helmuth
|
CBSC
|
Robust normalization of next generation sequencing data
|
Feb 2017
|
44
|
Kirsten Thobe
|
CBSC
|
Logical modeling of uncertainty in signaling pathways of cancer systems
|
Mar 2017
|
45
|
Matthias Lienhard
|
CBSC
|
Computational analysis of genome-wide methylation enrichment experiments
|
Mar 2017
|
46
|
Alexandra Reimers
|
CBSC
|
Understanding metabolic regulation and cellular resource allocation through optimization
|
Aug 2017
|
47
|
Matthew Huska
|
CBSC
|
Using machine learning to predict and better understand DNA methylation and genomic enhancers
|
Aug 2017
|
48
|
Sven-Leon Kuchenbecker
|
CBSC
|
Analysis of Antigen Receptor Repertoires Captured by High Throughput Sequencing
|
Jan 2018
|
49
|
Christoph Gorgulla
|
CBSC
|
Free Energy Methods Involving Quantum Physics, Path Integrals, and Virtual Screenings: Development, Implementation and Application in Drug Discovery
|
Apr 2018
|
50
|
Evgenia Youett
|
CBSC
|
Adaptive Multilevel Monte Carlo Methods for Random Elliptic Problems
|
Jun 2018
|
51
|
Mohammadhossein Moeinzadeh
|
CBSC
|
De novo and haplotype assembly of polyploid genomes
|
Aug 2018
|
52
|
Christopher M. Pockrandt
|
CBSC
|
Approximate String Matching - Improving Data Structures and Algorithms
|
Feb 2019
|
53
|
Temesgen Hailemariam Dadi
|
CBSC
|
Whole Genome Shotgun Sequencing Based Taxonomic Profiling Methods for Comparative Study of Microbial Communities
|
Jan 2019
|
54
|
Anna Ramisch
|
CBSC
|
Enhancer Prediction Based on Epigenomic Data
|
Feb 2019
|
55
|
Sabrina Krakau
|
CBSC
|
Statistical models to capture protein-RNA interaction footprints from truncation-based CLIP-seq data
|
Jan 2019
|
56
|
Luigi Sbailò
|
CBSC
|
Efficient multi-scale sampling methods in statistical physics
|
Sep 2019
|
57
|
Hongqing Han
|
CBSC
|
Towards accurate and efficient live cell imaging data analysis
|
Dec 2019
|
58
|
Stefan Budach
|
CBSC
|
Explainable Deep Learning Models for Biological Sequence Classification
|
Dec 2019
|
59
|
Lisa Barros de Andrade e Sousa
|
CBSC
|
Using interpretable machine learning to understand gene silencing dynamics during X-chromosome inactivation
|
Jan 2020
|
60
|
Tobias Zehnder
|
CBSC
|
Computational approaches for the prediction of gene regulatory elements and the analysis of their evolutionary conservation
|
Sep 2020
|
61
|
David Heller
|
CBSC
|
Structural variant calling using third-generation sequencing data
|
Sep 2020
|
62
|
Gal Barel
|
CBSC
|
Network propagation with node core for genotype-phenotype associations and module identification
|
Sep 2020
|
63
|
Roman Schulte-Sasse
|
CBSC
|
Integration of multi-omics data with graph convolutional networks to identify cancer-associated genes
|
Dec 2020
|
64
|
Melissa Bothe
|
CBSC
|
Investigating the genomic effects of glucocorticoid receptor activation - an analysis of transcriptional memory and mechanisms that direct divergent genomic occupancy of related transcription factors
|
Mar 2021
|
65
|
Vı́ctor Mireles Chávez
|
CBSC
|
Finding Reusable Modules Using Sparse Matrix Decompositions
|
July 2021
|
66
|
Martyna Gajos
|
CBSC
|
Analysis of the determinants of Pol II pausing
|
Feb 2022
|
67
|
Elzbieta Gralinska
|
CBSC
|
Association Plots visualize cluster-specific genes from high-dimensional transcriptomics data
|
April 2022
|
68
|
Eldar Abdullaev
|
CBSC
|
Dynamical Aspects of the Evolution of Segmental Duplications in the Human Genome
|
April 2022
|
69
|
Lam-Ha Ly
|
CBSC
|
Deciphering cellular heterogeneity by single-cell transcriptome analysis
|
April 2022
|
70
|
Philip Kleinert
|
CBSC
|
Computational interpretation of disease-causing, structural, and non-coding human genetic variants
|
June 2022
|
71
|
Annkatrin Bressin
|
CBSC
|
A Multi-Omics Analysis of Transcription Control by BRD4
|
May 2022
|
72
|
Shroddha Bose
|
BAC
|
The effect of a gain-of-function mutation in the Cl-/H+ exchanger ClC-7 in lysosomal and mitochondrial morphology and function
|
June 2022
|
73
|
Shaon Basu
|
BAC
|
Genetic and chemical hydrophobic modification of transcription factor condensates in human disease
|
September 2022
|
74
|
Jörg Winkler
|
CBSC
|
Algorithms for finding RNA sequence-structure motifs
|
September 2022
|
75
|
Laura Cifuentes Fontanals
|
CBSC
|
Methods for control strategy identification in Boolean networks
|
October 2022
|
76
|
Natalia López Anguita
|
BAC
|
Impact of hypoxia on embryonic and extraembryonic stem cells and during differentiation via gastruloid formation
|
November 2022
|
77
|
Amèlia Aragonés Hernández
|
BAC
|
Identification of Protogenin as a novel surface marker for early cortical neural stem cells
|
December 2022
|
78
|
Daniel Rosebrock
|
CBSC
|
Dissecting regional heterogeneity and modeling transcriptional cascades in brain organoids
|
December 2022
|
79
|
Bruna Los
|
BAC
|
Body temperature-controlled antiviral response and SARS-CoV-2 replication
|
April 2023
|
80
|
Sara Hetzel
|
CBSC
|
Investigation of DNA methylation heterogeneity in cancer
|
June 2023
|
81
|
Melania Nowicka
|
CBSC
|
Design and multi-criteria optimization of cell classifier circuits in cancer therapy
|
June 2023
|
82
|
Vahid Asimi
|
BAC
|
Roles of endogenous retroviruses in transcriptional condensates
|
June 2023
|
83
|
Paul-Lennard Mendez
|
BAC
|
Mechano-sensitivity of vascular BMP signaling - Insights into Fluid Shear Stress modulations from ligand to chromatin
|
July 2023
|
84
|
Mitra Darja Darvish
|
BAC
|
Utilizing alignment-free methods to enable quantitative gene expression analysis of large collections of sequencing data
|
August 2023
|
85
|
Gözde Kibar
|
CBSC
|
Exploring feature identification and machine learning in predicting protein-protein interactions of disordered proteins
|
October 2023
|
86
|
Jana Henck
|
BAC
|
Single cell sequencing as a phenotyping strategy to decipher the molecular mechanisms of developmental disorder
|
October 2023
|
87
|
Dhanur Iyer
|
BAC
|
The molecular landscape of developmental pausing in mammals
|
November 2023
|
88
|
Guido Pacini
|
CBSC
|
Transcriptome regulation during the X chromosome inactivation process
|
December 2023
|
89
|
Claire Jourdain
|
BAC
|
Role of the putative cohesin cofactors PDS5A and PDS5C in nuclear organization and gene regulation
|
February 2024
|
90
|
Anna Kristina Thedinga
|
BAC
|
Machine Learning for Cancer Survival Prediction
|
March 2024
|
91
|
Gaojianyong Wang
|
BAC
|
Copy number variation characterization using nanopore sequencing
|
May 2024
|
92
|
Nadezhda Malysheva
|
CBSC
|
Hybrid algorithm for efficient simulation of spreading processes on adaptive networks
|
June 2024
|
93
|
Julian Naderi
|
BAC
|
The dispersion of aromatic residues in TF IDRs controls a molecular trade-off between activity and specificity
|
June 2024
|
94
|
Gopika Sasikumar
|
BAC
|
Allosteric small-molecule probes to study splicing switches via conformational control of a spliceosomal RNA helicase
|
July 2024
|
95
|
Jeong-Eun Lee
|
BAC
|
ZEB2 and its regulatory impact on human brain evolution
|
December 2024
|
96
|
Fatemeh Zebardast
|
BAC
|
Exploring Alzheimer's Disease Pathology Using Gene Co-Expression Networks:
Insights into lncRNA and Protein-coding Genes Dysregulation
|
January 2025
|
97
|
Philine Guckelberger
|
BAC
|
|
January 2025
|
98
|
Biswajit Ghosh
|
BAC
|
Unveiling the Epigenetic Role of
Arabidopsis
PWO1: Linking Linear Chromatin Features to 3D Genome Architecture
|
January 2025
|