Current Position

Nottingham University School of Psychology

University Park, Nottingham NG7 2RD, UK


  • 1999 - June 2004: Computer Science/ Vienna University of Technology, graduated as Dipl.-Ing. (comparable to M.Sc.), with honors
  • January 2003 - June 2003: Computer Science at the University of Aarhus (Denmark)
  • Three years experience as a tutor, especially in the area of algorithms and data structures
  • Scholarships
    • 'Förderstipendium' (scholarship to support work on diploma thesis) of Vienna University of Technology
    • IMPRS scholarship


Publications from time as IMPRS fellow

  • Knut Reinert, Markus Bauer, Andreas Döring, Gunnar W. Klau, and Aaron L. Halpern (2007)
    A general paradigm for fast, adaptive clustering of biological sequences
    Proc. of GCB 2007
  • Markus Bauer, Gunnar W. Klau and Knut Reinert (2008)
    An Exact Mathematical Programming Approach to Multiple RNA Sequence-Structure Alignment.
    Algorithmic Operations Research 3 (2)
  • Markus Bauer, Gunnar W. Klau and Knut Reinert (2007)
    Accurate Multiple Sequence-Structure Alignment of RNA Sequences Using Combinatorial Optimization.
    BMC Bioinformatics 8: 271
  • Patrick May, Gunnar W. Klau, Markus Bauer, and Thomas Steinke (2007)
    Accelerated microRNA Precursor Detection Using the Smith-Waterman Algorithm on FPGAs.
    in Proceedings of GCCB 2006 (International Workshop on Distributed, High-Performance, and Grid Computing in Computational Biology, Eilat, Israel, January 21-24, 2007), W. Dubitzky et al. (eds.)
    Lecture Notes in Bioinformatics, 4360, pp. 19-32, Springer, Berlin, 2007
  • Bauer, M., Klau, G.W., Reinert, K. (2005)
    Multiple Structural RNA Alignment with Lagrangian Relaxation.
    Proceedings of the 5th Workshop on Algorithms Bioinformatics (WABI-05)
  • Bauer, M., Klau, G.W., Reinert, K. (2005)
    Fast and Accurate Structural RNA Alignment by Progressive Lagrangian Relaxation.
    Proceedings of the 1st International Symposium on Computational Life Science (CompLife-05), pages 217-228
  • Markus Bauer and Gunnar Klau (2004).
    Structural Alignment of Two RNA Sequences with Lagrangian Relaxation.
    Proceedings of the 15th International Symposium, ISAAC 2004, Hong Kong, Springer Verlag, LNCS 3341, 113-125.
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