J Ibn-Salem et al. (2014) Deletions of chromosomal regulatory boundaries are associated with congenital disease. Genome Biol., 15 (9): 423
J Lasserre, HR Chung, M Vingron (2013) Finding associations among histone modifications using sparse partial correlation networks. PLoS Comput Biol., 9 (9): e1003168
A Mammana, M Vingron, HR Chung (2013) Inferring nucleosome positions with their histone mark annotation from ChIP data. Bioinformatics, 29 (20): 2547-2554
R Sun, MI Love, T Zemojtel, AK Emde, HR Chung, M Vingron, S Haas (2012) Breakpointer: using local mapping artifacts to support sequence breakpoint discovery from single-end reads. Bioinformatics, 28 (7): 1024-5
F Heise, HR Chung, JM Weber, Z Xu, L Klein-Hitpass, LM Steinmetz, M Vingron, AE Ehrenhofer-Murray (2011) Genome-wide H4 K16 acetylation by SAS-I is deposited independently of transcription and histone exchange. Nucleic Acids Res., 40 (1): 65-74
HR Chung, I Dunkel, F Heise, C Linke, S Krobitsch, AE Ehrenhofer-Murray, SR Sperling, M Vingron (2010) The effect of micrococcal nuclease digestion on nucleosome positioning data. PLoS One, 5 (12): e15754
U Löhr, HR Chung, M Beller, H Jäckle (2010) Bicoid - morphogen function revisited. Fly (Austin), 4 (3)
R Karlić, HR Chung, J Lasserre, K Vlahovicek, M Vingron (2010) Histone modification levels are predictive for gene expression. Proc Natl Acad Sci USA, 107 (7): 2926-31
HR Chung, M Vingron (2009) Comparison of sequence-dependent tiling array normalization approaches. BMC Bioinformatics, 10: 204
T Zemojtel, SM Kielbasa, PF Arndt, HR Chung, M Vingron (2009) Methylation and deamination of CpGs generated p53-binding sites on a genomic scale. Trends Genet., 25 (2): 63-6
U Löhr, HR Chung, M Beller, H Jäckle (2009) Antagonistic action of Bicoid and the repressor Capicua determines the spatial limits of Drosophila head gene expression domains. Proc Natl Acad Sci USA, 106 (51): 21695-700
HR Chung, D Kostka, M Vingron (2007) A physical model for tiling array analysis. Bioinformatics, 23 (13): i80-6
HR Chung, U Löhr, H Jäckle (2007) Lineage-specific expansion of the zinc finger associated domain ZAD. Mol Biol Evol., 24 (9): 1934-43
N Staudt, S Fellert, HR Chung, H Jäckle, G Vorbrüggen (2006) Mutations of the Drosophila zinc finger-encoding gene vielfältig impair mitotic cell divisions and cause improper chromosome segregation. Mol Biol Cell., 17 (5): 2356-65
N Staudt et al. (2005) Gain-of-function screen for genes that affect Drosophila muscle pattern formation. PLoS Genet., 1 (4): e55
N Beinert, M Werner, G Dowe, HR Chung, H Jäckle, U Schäfer (2004) Systematic gene targeting on the X chromosome of Drosophila melanogaster. Chromosoma, 113 (6): 271-5
A Matyash, HR Chung, H Jäckle (2004) Genome-wide mapping of in vivo targets of the Drosophila transcription factor Kruppel. J Biol Chem., 279 (29): 30689-96
M Hirosawa-Takamori, HR Chung, H Jäckle (2004) Conserved selenoprotein synthesis is not critical for oxidative stress defence and the lifespan of Drosophila. EMBO Rep., 5 (3): 317-22
R Jauch, GP Bourenkov, HR Chung, H Urlaub, U Reidt, H Jäckle, MC Wahl (2003) The zinc finger-associated domain of the Drosophila transcription factor grauzone is a novel zinc-coordinating protein-protein interaction module. Structure, 11 (11): 1393-402
HR Chung, U Schäfer, H Jäckle, S Böhm (2002) Genomic expansion and clustering of ZAD-containing C2H2 zinc-finger genes in Drosophila. EMBO Rep., 3 (12): 1158-62