More Arndt publications

  • F Massip, M Sheinman, S Schbath, PF Arndt (2015) 
    How evolution of genomes is reflected in exact DNA sequence match statistics. 
    Mol Biol Evol., 32 (2): 524-35
  • JM Muiño, EE Kuruoğlu, PF Arndt (2014) 
    Evidence of a cancer type-specific distribution for consecutive somatic mutation distances. 
    Comput Biol Chem.S1476-9271 (14): 00091-7
  • G Ebert et al. (2014) 
    Distribution of segmental duplications in the context of higher order chromatin organisation of human chromosome 7. 
    BMC Genomics15: 537
  • CE Busse, I Czogiel, P Braun, PF Arndt, H Wardemann (2014) 
    Single-cell based high-throughput sequencing of full-length immunoglobulin heavy and light chain genes. 
    Eur J Immunol., 44 (2): 597-603
  • Y Clément, PF Arndt (2013) 
    Meiotic recombination strongly influences GC-content evolution in short regions in the mouse genome. 
    Mol Biol Evol., 30 (12): 2612-8
  • CF Mugal, PF Arndt, H Ellegren (2013)
    Twisted signatures of GC-biased gene conversion embedded in an evolutionary stable karyotype.
    Mol Biol Evol, 30 (7): 1700-12
  • T Schütze, B Wilhelm, N Greiner et al. (2011)
    Probing the SELEX Process with Next-Generation Sequencing
    PLoS One, 6 (12): e29604
  • BP Cusack, PF Arndt, L Duret, H Roest Crollius (2011)
    Preventing dangerous nonsense: selection for robustness to transcriptional error in human genes.
    PLoS Genet., 7 (10): e1002276
  • P Polak, R Querfurth, PF Arndt (2010)
    The evolution of transcription-associated biases of mutations across vertebrates.
    BMC Evol Biol.10 (1): 187
  • P Polak, PF Arndt (2009) 
    Long-range bidirectional strand asymmetries originate at CpG islands in the human genome. 
    Genome Biol Evol., 189-97
  • F Squartini, PF Arndt (2008)
    Quantifying the stationarity and time reversibility of the nucleotide substitution process.
    Mol Biol Evol25, 2525-2535
  • P Polak, PF Arndt (2008)
    Transcription induces strand-specific mutations at the 5' end of human genes.
    Genome Res 18, 1216-1223
  • L Duret, PF Arndt (2008)
    The impact of recombination on nucleotide substitutions in the human genome.
    PLoS Genetics 4, e1000071
  • PW Messer, PF Arndt (2007)
    The majority of recent short DNA insertions in the human genome are tandem duplications.
    Mol Biol Evol 24, 1190-1197
  • PW Messer, R Bundschuh, M Vingron, PF Arndt (2007)
    Effects of long-range correlations in DNA on sequence alignment score statistics.
    J Comput Biol 14, 655-668
  • PW Messer, R Bundschuh, M Vingron, PF Arndt (2006)
    Alignment Statistics for Long-Range Correlated Genomic Sequences
    Research in Computational Molecular Biology, RECOMB 2006 Proceedings 426-440
  • PF Arndt, T Hwa (2005)
    Identification and measurement of neighbor dependent nucleotide substitution processes
    Bioinformatics 21, 2322-2328
  • PW Messer, PF Arndt, M Lassig (2005)
    Solvable sequence evolution models and genomic correlations
    Physical Review Letters 94, 138103
  • PF Arndt, DA Petrov, T Hwa (2003)
    Distinct changes of genomic biases in nucleotide substitution at the time of Mammalian radiation
    Molecular Biology and Evolution 20, 1887-96
  • PF Arndt, CB Burge, T Hwa (2003)
    DNA sequence evolution with neighbor-dependent mutation
    Journal of Computatioal Biology 10, 313-22
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