Sasikumar, G.: Allosteric small-molecule probes to study splicing switches via conformational control of a spliceosomal RNA helicase. Dissertation (2024)

Wang, G.: Copy number variation characterization using nanopore sequencing. Dissertation (2024)

Malysheva, N.: Hybrid algorithm for efficient simulation of spreading processes on adaptive networks. Dissertation (2024)

Naderi, J.: The dispersion of aromatic residues in TF IDRs controls a molecular trade-off between activity and specificity. Dissertation (2024)

Kibar, G.: Exploring feature identification and machine learning in predicting protein-protein interactions of disordered proteins. Dissertation (2024)

Jourdain, C.: Role of the putative cohesin cofactors PDS5A and PDS5C in nuclear organization and gene regulation. Dissertation (2024)

Hübner, P.: Association Plots – A Method to Detect Tissue-Specific Regulatory Patterns? Master (2024)

Kane, M.: Mathematical Modeling of High-Risk Viral Mutations. Master (2024)

Lopez Ruiz de Vargas, S.: Adding 3D chromatin structure information to enhancer- target prediction with CENTRE. Master (2024)

Raei, W. A.: Genotyping tandem repeats: Introducing Tandem Twister, a rapid and universal tool for long-read sequencing technologies. Master (2024)

Özgüldez, H. Ö.; Bulut-Karslioglu, A.: Dormancy, Quiescence, and Diapause: Savings Accounts for Life. Annual Review of Cell and Developmental Biology 40, pp. 25 - 49 (2024)

Martitz, A.; Schulz, E. G.: Spatial orchestration of the genome: topological reorganisation during X-chromosome inactivation. Current Opinion in Genetics & Development 86, Article 102198 (2024)

Kanata, E.; Duffié, R.; Schulz, E. G.: Establishment and maintenance of random monoallelic expression. Development 151 (10), Article dev201741 (2024)

Jakobson, C. M.; Hartl , J.; Trébulle, P.; Mülleder, M.; Jarosz , D. F.; Ralser, M.: A genome-to-proteome atlas charts natural variants controlling proteome diversity and forecasts their fitness effects. bioRxiv (2024)

Schindler, M.; Feregrino, C.; Aldrovandi, S.; Lo, B.-W.; Monaco, A. A.; Ringel, A. R.; Morales, A.; Zehnder, T.; Behncke, R. Y.; Glaser, J. et al.; Barclay, A.; Andrey, G.; Kragesteen, B. K.; Hägerling, R.; Haas, S.; Vingron, M.; Ulitsky, I.; Marti-Renom, M.; Hechavarria, J.; Fasel, P.; Hiller, M.; Lupiáñez, D.; Mundlos, S.; Real, F. M.: Comparative single-cell analyses reveal evolutionary repurposing of a conserved gene program in bat wing development. bioRxiv: the preprint server for biology (2024)

Schwaemmle, T.; Noviello, G.; Kanata, E.; Froehlich, J. J.; Bothe, M.; Altay, A.; Scouarnec, J.; Feng, V.-Y.; Vingron, M.; Schulz, E. G.: Reporter CRISPR screens decipher cis- and trans-regulatory principles at the Xist locus. bioRxiv (2024)

Glaser, J.; Cova, G.; Fauler, B.; Prada-Medina, C. A.; Stanislas, V.; Phan, M. H. Q.; Schöpflin, R.; Aktas, Y.; Franke, M.; Andrey, G. et al.; Paliou, C.; Laupert, V.; Chan, W.-L.; Wittler, L.; Mielke, T.; Mundlos, S.: Enhancer adoption by an LTR retrotransposon generates viral-like particles causing developmental limb phenotypes. bioRxiv (2024)

Guckelberger, P.; Doughty, B. R.; Munson, G.; Rao, S. S. P.; Tan, Y.; Cai, X. S.; Fulco, C. P.; Nasser, J.; Mualim, K. S.; Bergman, D. T. et al.; Ray, J.; Jagoda, E.; Munger, C. J.; Gschwind, A. R.; Sheth, M. U.; Tan, A. S.; Pulido, S. G.; Mitra, N.; Weisz, D.; Shamim, M. S.; Durand, N. C.; Mahajan, R.; Khan, R.; Steinmetz, L. M.; Kanemaki, M. T.; Lander, E. S.; Meissner, A.; Lieberman Aiden, E.; Engreitz, J. M.: Cohesin-mediated 3D contacts tune enhancer-promoter regulation. bioRxiv (2024)

Zagoren, E.; Dias, N.; Smith, Z. D.: A second wave of Notch signaling diversifies the intestinal secretory lineage. bioRxiv (2024)

Mutzel, V.; Schwämmle, T.; Oeverdieck, S.; Librenjak, L.; Boesen, B.; Bothe, M.; Gjaltema, R. A. F.; Dunkel, I.; Noviello, G.; Schulz, E. G.: Antisense transcription can induce expression memory via stable promoter repression. bioRxiv (2024)