Publikationen von Alexander Meissner

Tim P. Hasenbein, Sarah Hoelzl, Zachary D. Smith, Chiara Gerhardinger, Marion O. C. Gonner, Antonio Aguilar-Pimentel, Oana V. Amarie, Lore Becker, Julia Calzada-Wack, Nathalia R. V. Dragano, Patricia da Silva-Buttkus, Lillian Garrett, Sabine M. Hölter, Markus Kraiger, Manuela A. Östereicher, Birgit Rathkolb, Adrián Sanz-Moreno, Nadine Spielmann, Wolfgang Wurst, Valerie Gailus-Durner, Helmut Fuchs, Martin Hrabě de Angelis, Alexander Meissner, Stefan Engelhardt, John L. Rinn, and Daniel Andergassen, "X-linked deletion of Crossfirre, Firre, and Dxz4 in vivo uncovers diverse phenotypes and combinatorial effects on autosomes," Nature Communications 15 (1), Article 10631 (2024).

Maximilian Stötzel, Chieh-Yu Cheng, Ibrahim A. Ilik, Abhishek Sampath Kumar, Persia Akbari-Omgba, Vera A. van der Weijden, Yufei Zhang, Martin Vingron, Alexander Meissner, Tugce Aktas, Helene Kretzmer, and Aydan Bulut-Karslioglu, "TET activity safeguards pluripotency throughout embryonic dormancy," Nature Structural & Molecular Biology 31 (10), 1625-1639 (2024).

Julia Batki, Sara Hetzel, Dennis Schifferl, Adriano Bolondi, Maria Walther, Lars Wittler, Stefanie Grosswendt, Bernhard G. Herrmann, and Alexander Meissner, "Extraembryonic gut endoderm cells undergo programmed cell death during development," Nature Cell Biology 26 (6), 868-877 (2024).

Adriano Bolondi, Benjamin K. Law, Helene Kretzmer, Seher Ipek Gassaloglu, René Buschow, Christina Riemenschneider, Dian Yang, Maria Walther, Jesse V. Veenvliet, Alexander Meissner, Zachary D. Smith, and Michelle M. Chan, "Reconstructing axial progenitor field dynamics in mouse stem cell-derived embryoids," Developmental Cell 59 (12), 1489-1505 (2024).

Nanami S. Sato, Viviane S. Rosa , Aly Makhlouf, Helene Kretzmer, Abhishek Sampath Kumar, Stefanie Grosswendt, Alexandra L. Mattei, Olivia Courbot, Steffen Wolf, Jerome Boulanger, Frederic Langevin, Michal Wiacek, Daniel Karpinski, Alberto Elosegui-Artola, Alexander Meissner, Magdalena Zernicka-Goetz , and Marta N. Shahbazi, "Basal delamination during mouse gastrulation primes pluripotent cells for differentiation," Developmental Cell 59 (10), 1252-1268 (2024).

Hannes Hauswedell , Sara Hetzel, Simon G. Gottlieb , Helene Kretzmer, Alexander Meissner, and Knut Reinert, "Lambda3: homology search for protein, nucleotide, and bisulfite-converted sequences," Bioinformatics 40 (3), Article btae097 (2024).

Marius-Konstantin Klever, Eric Sträng , Sara Hetzel, Julius Jungnitsch, Anna Dolnik, Robert Schöpflin, Jens-Florian Schrezenmeier, Felix Schick, Olga Blau, Jörg Westermann, Frank G . Rücker , Zuyao Xia, Konstanze Döhner, Hubert Schrezenmeier, Malte Spielmann, Alexander Meissner, Uirá Souto Melo, Stefan Mundlos, and Lars Bullinger, "AML with complex karyotype: extreme genomic complexity revealed by combined long-read sequencing and Hi-C technology," Blood Advances 7 (21), 6520-6531 (2023).

Liat Ravid Lustig, Abhishek Sampath Kumar, Till Schwämmle, Ilona Dunkel, Gemma Noviello, Elodie Limberg, Raha Weigert, Guido Pacini, René Buschow, Afrah Ghauri, Maximilian Stötzel, Lars Wittler, Alexander Meissner, and Edda G. Schulz, "GATA transcription factors drive initial Xist upregulation after fertilization through direct activation of long-range enhancers," Nature Cell Biology 25 (11), 1704-1715 (2023).

Michael S. Hoetker, Masaki Yagi, Bruno Di Stefano, Justin Langerman, Simona Cristea, Lai Ping Wong, Aaron J. Huebner, Jocelyn Charlton, Weixian Deng, Chuck Haggerty, Ruslan I. Sadreyev, Alexander Meissner, Franziska Michor, Kathrin Plath, and Konrad Hochedlinger, "H3K36 methylation maintains cell identity by regulating opposing lineage programmes," Nature Cell Biology 25, 1121-1134 (2023).

Abhishek Sampath Kumar, Luyi Tian, Adriano Bolondi, Amèlia Aragonés Hernández, Robert Stickels, Helene Kretzmer, Evan Murray, Lars Wittler, Maria Walther, Gabriel Barakat, Leah Haut, Yechiel Elkabetz, Evan Z. Macosko, Léo Guignard, Fei Chen, and Alexander Meissner, "Spatiotemporal transcriptomic maps of whole mouse embryos at the onset of organogenesis," Nature Genetics 55 (7), 1176-1185 (2023).

Hongshan Guo, Joanna A. Vuille, Ben S. Wittner, Emily M. Lachtara, Yu Hou, Maoxuan Lin, Ting Zhao, Ayush T. Raman, Hunter C. Russell, Brittany A. Reeves, Haley M. Pleskow, Chin-Lee Wu, Andreas Gnirke, Alexander Meissner, Jason A. Efstathiou, Richard J. Lee, Mehmet Toner, Martin J. Aryee, Michael S. Lawrence, David T. Miyamoto, Shyamala Maheswaran, and Daniel A. Haber, "DNA hypomethylation silences anti-tumor immune genes in early prostate cancer and CTCs," Cell 186 (13), 2765-2782 (2023).

Raha Weigert, Sara Hetzel, Nina Bailly, Chuck Haggerty, Ibrahim A. Ilik, Philip Yuk Kwong Yung, Carmen Navarro, Adriano Bolondi, Abhishek Sampath Kumar, Chiara Anania, Björn Brändl, David Meierhofer, Darío G. Lupiáñez, Franz-Josef Müller, Tugce Aktas, Simon J. Elsässer, Helene Kretzmer, Zachary D. Smith, and Alexander Meissner, "Dynamic antagonism between key repressive pathways maintains the placental epigenome," Nature Cell Biology 25 (4), 579-591 (2023).

Alexandro Landshammer, Adriano Bolondi, Helene Kretzmer, Christian Much, Rene Buschow, Alina Rose, Hua-Jun Wu, Sebastian D. Mackowiak, Bjoern Braendl, Pay Gießelmann, Rosaria Tornisiello, Krishna Mohan Parsi, Jack Huey, Thorsten Mielke, David Meierhofer, René Maehr, Denes Hnisz, Franziska Michor, John L. Rinn, and Alexander Meissner, "T-REX17 is a transiently expressed non-coding RNA essential for human endoderm formation," eLife 12, e83077 (2023).

Laura E. Stevens , Guillermo Peluffo, Xintao Qiu, Daniel Temko , Anne Fassl , Zheqi Li , Anne Trinh , Marco Seehawer, Bojana Jovanovic, Masa Aleckovic , Callahan M. Wilde , Renee C. Geck, Shaokun Shu, Natalie L. Kingston, Nicholas W. Harper, Vanessa Almendro, Alanna L. Pyke, Shawn B. Egri , Malvina Papanastasiou, Kendell Clement , Ningxuan Zhou , Sarah Walker, Jacqueline Salas, So Yeon Park, David A. Frank, Alexander Meissner, Jacob D. Jaffe , Piotr Sicinski , Alex Toker, Franziska Michor , Henry W. Long , Beth A. Overmoyer , and Kornelia Polyak, "JAK-STAT signaling in inflammatory breast cancer enables chemotherapy-resistant cell states," Cancer research: an official organ of the American Association for Cancer Research 83 (2), 264-284 (2023).

Binyamin A. Knisbacher, Ziao Lin, Cynthia K. Hahn, Ferran Nadeu, Martí Duran-Ferrer, Kristen E. Stevenson, Eugen Tausch, Julio Delgado, Alex Barbera-Mourelle, Amaro Taylor-Weiner, Pablo Bousquets-Muñoz, Ander Diaz-Navarro, Andrew Dunford, Shankara Anand, Helene Kretzmer, Jesus Gutierrez-Abril, Sara López-Tamargo, Stacey M. Fernandes, Clare Sun, Mariela Sivina, Laura Z. Rassenti, Christof Schneider, Shuqiang Li, Laxmi Parida, Alexander Meissner, François Aguet , Jan A. Burger, Adrian Wiestner, Thomas J. Kipps, Jennifer R. Brown, Michael Hallek, Chip Stewart, Donna S. Neuberg, José I. Martín-Subero , Xose S. Puente, Stephan Stilgenbauer, Catherine J. Wu, Elias Campo, and Gad Getz, "Molecular map of chronic lymphocytic leukemia and its impact on outcome," Nature Genetics 54, 1664-1674 (2022).

Alessa Ringel, Quentin Szabo, Andrea M. Chiariello, Konrad Chudzik, Robert Schöpflin, Patricia Rothe, Alexandra L. Mattei, Tobias Zehnder, Dermot Harnett, Verena Laupert, Simona Bianco, Sara Hetzel, Juliane Glaser, Mai H. Q. Phan, Magdalena Schindler, Daniel M. Ibrahim, Christina Paliou, Andrea Esposito, César A. Prada-Medina, Stefan A. Haas, Peter Giere, Martin Vingron, Lars Wittler, Alexander Meissner, Mario Nicodemi, Giacomo Cavalli, Frédéric Bantignies, Stefan Mundlos, and Michael I. Robson, "Repression and 3D-restructuring resolves regulatory conflicts in evolutionarily rearranged genomes," Cell 185 (20), 3689-3704 (2022).

Alexandro Landshammer, Adriano Bolondi, Helene Kretzmer, Christian Much, Rene Buschow, Alina Rose, Hua-Jun Wu, Sebastian Mackowiak, Bjoern Braendl, Pay Giesselmann, Rosaria Tornisiello, Krishna Mohan Parsi, Jack Huey, Thorsten Mielke, David Meierhofer, René Maehr, Denes Hnisz, Franziska Michor, John L. Rinn, and Alexander Meissner, "Discovery and characterization of LNCSOX17 as an essential regulator in human endoderm formation," bioRxiv (Preprint Server) (2022).

Vahid Asimi, Abhishek Sampath Kumar, Henri Niskanen, Christina Riemenschneider, Sara Hetzel, Julian Naderi, Nina Fasching, Niko Popitsch, Manyu Du, Helene Kretzmer, Zachary D. Smith, Raha Weigert, Maria Walther, Sainath Mamde, David Meierhofer, Lars Wittler, Rene Buschow, Bernd Timmermann, Ibrahim I. Cisse, Stefan L. Ameres, Alexander Meissner, and Denes Hnisz, "Hijacking of transcriptional condensates by endogenous retroviruses," Nature Genetics 54, 1238-1247 (2022).

Wen Yuan, Sai Ma, Juliana R. Brown, Kwanho Kim, Vanessa Murek, Lucia Trastulla, Alexander Meissner, Simona Lodato, Ashwin S. Shetty, Joshua Z. Levin, Jason D. Buenrostro, Michael J. Ziller, and Paola Arlotta, "Temporally divergent regulatory mechanisms govern neuronal diversification and maturation in the mouse and marmoset neocortex," Nature Neuroscience 25 (8), 1049-1058 (2022).

Alexandra L. Mattei, Nina Bailly, and Alexander Meissner, "DNA methylation: a historical perspective," Trends in Genetics 38 (7), 676-707 (2022).