Hebels, D. G.; Rasche, A.; Herwig, R.; van Westen, G. J.; Jennen, D. G.; Kleinjans, J. C.: A Systems Biology Approach for Identifying Hepatotoxicant Groups Based on Similarity in Mechanisms of Action and Chemical Structure. In: In Silico Methods for Predicting Drug Toxicity (Ed. Benfenati , E.) (2016)

Vilardell, M.; Herwig, R.: Predictive mechanisms in stem cells: an in vitro system based method for testing carcinogenicity. In: Handbook of Nanotoxicology, Nanomedicine and Stem Cell Use in Toxicology, pp. 337 - 346 (Eds. Sahu, . C.; Casciano, D. A.). John Wiley & Sons, Ltd, Hoboken, NJ (2014)

Bauer, O.; Janitz, M.; Guerasimova, A.; Herwig, R.; Lehrach, H.; Radelof, U.: Oligonucleotide fingerprinting including differental cDNA library screning. In: Analysing gene expression. A handbook of methods: Possibilities and, pp. 463 - 471 (Eds. Lorkowski, S.; Cullen, P.). Wiley-VCH, Weinheim (2002)

Herwig, R.; Lehrach, H.: Clustering gene expression profiles. In: Analysing gene expression. A handbook of methods: Possibilities and, pp. 790 - 798 (Eds. Lorkowski, S.; Cullen, P.). Wiley-VCH, Weinheim (2002)

Herwig, R.; Schuchhardt, J.; Eickhoff, H.; Herzel, H.; Lehrach, H.: Datenanalyse von Biochips: Von der Sequenz zum System. In: Grundlagen der Molekularen Medizin, pp. 360 - 387 (Eds. Ganten, D.; Ruckpaul, K.). Springer Verlag, Berlin [u.a.] (2002)

Reconstruction and validation of gene regulatory networks with neural networks. The 2nd Foundations of Systems Biology in Engineering Conference, FOSBE 2007, Stuttgart, September 09, 2007 - September 12, 2007. Universität Stuttgart, Stuttgart (2007), ? pp.

Thedinga, K.: Machine Learning for Cancer Survival Prediction. Dissertation (2024)

Kamburov, A.: More complete and more accurate interactomes for elucidating the mechanisms of complex diseases. Dissertation (2012)

31st Animal Protection Research Prize of the Federal Ministry of Food, Agriculture and Consumer Protection for “A systems biology approach for predicting carcinogenesis of chemicals in the liver. (accepted)

Lienhard, M.; van den Beucken, T.; Timmermann, B.; Hochradel, M.; Boerno, S.; Caiment, F.; Vingron, M.; Herwig, R.: Long-read transcriptome sequencing analysis with IsoTools. bioRxiv (2021)