The following publications were published exclusively under the affiliation of the Max Planck Society. For publications by the principal investigator outside of the Max Planck Society, see the links on the lower left.

Journal Article (77)

Journal Article
Qin, B.; Lauer, S. M.; Balke, A.; Vieira-Vieira, C. H.; Bürger, J.; Mielke, T.; Selbach, M.; Scheerer, P.; Spahn, C. M. T.; Nikolay, R.: Cryo-EM captures early ribosome assembly in action. Nature Communications 14 (1), Article 898 (2023)
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Mensah, M. A.; Niskanen, H.; Magalhães, A. P.; Basu, S.; Kircher, M.; Sczakiel, H. L.; Reiter, A. M. V.; Elsner, J.; Meinecke, P.; Biskup, S. et al.; Chung, B. H. Y.; Dombrowsky, G.; Eckmann-Scholz, C.; Hitz, M. P.; Hoischen, A.; Holterhus, P.-M.; Hülsemann, W.; Kahrizi, K.; Kalscheuer, V. M.; Kan, A.; Krumbiegel, M.; Kurth, I.; Leubner, J.; Longardt, A. C.; Moritz, J. D.; Najmabadi, H.; Skipalova, K.; Snijders Blok, L.; Tzschach, A.; Wiedersberg, E.; Zenker, M.; Garcia-Cabau, C.; Buschow, R.; Salvatella, X.; Kraushar, M. L.; Mundlos, S.; Caliebe, A.; Spielmann, M.; Horn, D.; Hnisz, D.: Aberrant phase separation and nucleolar dysfunction in rare genetic diseases. Nature 614 (7948), pp. 564 - 571 (2023)
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Köhler, J.; Chen, Y.; Krämer, A.; Clementi, C.; Noé, F.: Flow-Matching: Efficient Coarse-Graining of Molecular Dynamics. Journal of Chemical Theory and Computation 19 (3), pp. 942 - 952 (2023)
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Raschka , T.; Sood , M.; Schultz, B.; Altay, A.; Ebeling, C.; Fröhlich, H.: AI reveals insights into link between CD33 and cognitive impairment in Alzheimer’s Disease. PLOS Computational Biology 19 (2), e1009894 (2023)
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Le-Trilling, V. T. K.; Banchenko, S.; Paydar, D.; Leipe, P. M.; Binting, L.; Lauer, S.; Graziadei, A.; Klingen, R.; Gotthold, C.; Bürger, J. et al.; Bracht, T.; Sitek, B.; Lebbink, R. J.; Malyshkina, A.; Mielke, T.; Rappsilber, J.; Spahn, C. M. T.; Voigt, S.; Trilling, M.; Schwefel, D.: Structural mechanism of CRL4-instructed STAT2 degradation via a novel cytomegaloviral DCAF receptor. EMBO Journal 42 (5), e112351 (2023)
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Palmer, E. E.; Pusch, M.; Picollo, A.; Forwood, C.; Nguyen, M. H.; Suckow, V.; Gibbons, J.; Hoff, A.; Sigfrid, L.; Megarbane, A. et al.; Nizon, M.; Cogné, B.; Beneteau, C.; Alkuraya, F. S.; Chedrawi, A.; Hashem, M. O.; Stamberger, H.; Weckhuysen, S.; Vanlander, A.; Ceulemans, B.; Rajagopalan, S.; Nunn, K.; Arpin, S.; Raynaud, M.; Motter, C. S.; Ward-Melver, C.; Janssens, K.; Meuwissen, M.; Beysen, D. ....; Kalscheuer, V. M.: Functional and clinical studies reveal pathophysiological complexity of CLCN4-related neurodevelopmental condition. Molecular Psychiatry 28 (2), pp. 668 - 697 (2023)
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Sreenivasan, V. K. A.; Dore, R.; Resch, J.; Maier, J.; Dietrich, C.; Henck, J.; Balachandran, S.; Mittag, J.; Spielmann, M.: Single-cell RNA-based phenotyping reveals a pivotal role of thyroid hormone receptor alpha for hypothalamic development. Development 150 (3), Article dev201228 (2023)
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Henze, L.; Braun, J.; Meyer-Arndt, L.; Jürchott, K.; Schlotz, M.; Michel, J.; Grossegesse, M.; Mangold, M.; Dingeldey, M.; Kruse, B. et al.; Holenya, P.; Mages, N.; Reimer, U.; Eckey, M.; Schnatbaum, K.; Wenschuh, H.; Timmermann, B.; Klein, F.; Nitsche, A.; Giesecke-Thiel, C.; Loyal, L.; Thiel, A.: Primary ChAdOx1 vaccination does not reactivate pre-existing, cross-reactive immunity. Frontiers in immunology 14, 1056525 (2023)
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Landshammer, A.; Bolondi, A.; Kretzmer, H.; Much, C.; Buschow, R.; Rose, A.; Wu, H.-J.; Mackowiak, S. D.; Braendl, B.; Gießelmann, P. et al.; Tornisiello, R.; Mohan Parsi, K.; Huey, J.; Mielke, T.; Meierhofer, D.; Maehr, R.; Hnisz, D.; Michor, F.; Rinn, J. L.; Meissner, A.: T-REX17 is a transiently expressed non-coding RNA essential for human endoderm formation. eLife 12, Article e83077 (2023)
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Binsch, C.; Barbosa, D. M.; Hansen-Dille, G.; Hubert, M.; Hodge, S. M.; Kolasa, M.; Jeruschke, K.; Weiß, J.; Springer, C.; Gorressen, S. et al.; Fischer, J. W.; Lienhard, M.; Herwig, R.; Börno, S.; Timmermann, B.; Cremer, A. L.; Backes, H.; Chadt, A.; Al-Hasani, H.: Deletion of Tbc1d4/As160 abrogates cardiac glucose uptake and increases myocardial damage after ischemia/reperfusion. Cardiovascular Diabetology 22 (1), 17 (2023)
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Nabavizadeh, N.; Bressin, A.; Shboul, M.; Moreno Traspas, R.; Chia, P. H.; Bonnard, C.; Szenker-Ravi, E.; Saribas, B.; Beillard, E.; Altunoglu, U. et al.; Hojati, Z.; Drutman, S.; Freier, S.; El-Khateeb, M.; Fathallah, R.; Casanova, J.-L.; Soror, W.; Arafat, A.; Escande-Beillard, N.; Mayer, A.; Reversade, B.: A progeroid syndrome caused by a deep intronic variant in TAPT1 is revealed by RNA/SI-NET sequencing. Embo Molecular Medicine 15 (2), Article e16478 (2023)
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Stevens , L. E.; Peluffo, G.; Qiu, X.; Temko , D.; Fassl , A.; Li , Z.; Trinh , A.; Seehawer, M.; Jovanovic, B.; Aleckovic , M. et al.; Wilde , C. M.; Geck, R. C.; Shu, S.; Kingston, N. L.; Harper, N. W.; Almendro, V.; Pyke, A. L.; Egri , S. B.; Papanastasiou, M.; Clement , K.; Zhou , N.; Walker, S.; Salas, J.; Park, S. Y.; Frank, D. A.; Meissner, A.; Jaffe , J. D.; Sicinski , P.; Toker, A.; Michor , F.; Long , H. W.; Overmoyer , B. A.; Polyak, K.: JAK-STAT signaling in inflammatory breast cancer enables chemotherapy-resistant cell states. Cancer research: an official organ of the American Association for Cancer Research 83 (2), pp. 264 - 284 (2023)
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Shahryari, M.; Keller, S.; Meierhofer, D.; Wallach, I.; Safraou, Y.; Guo, J.; Marticorena Garcia, S. R.; Braun, J.; Makowski, M. R.; Sack, I. et al.; Berndt, N.: On the relationship between metabolic capacities and in vivo viscoelastic properties of the liver. Frontiers in Bioengineering and Biotechnology 10, 1042711 (2023)
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Altenhofen, D.; Khuong, J. M.-A.; Kuhn, T.; Lebek, S.; Görigk, S.; Kaiser, K.; Binsch, C.; Griess, K.; Knebel, B.; Belgardt, B.-F. et al.; Cames, S.; Eickelschulte, S.; Stermann, T.; Rasche, A.; Herwig, R.; Weiss, J.; Vogel, H.; Schürmann, A.; Chadt, A.; Al-Hasani, H.: E96V Mutation in the Kdelr3 Gene Is Associated with Type 2 Diabetes Susceptibility in Obese NZO Mice. International Journal of Molecular Sciences 24 (1), 845 (2023)
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Eischer, N.; Arnold, M.; Mayer, A.: Emerging roles of BET proteins in transcription and co-transcriptional RNA processing. Wiley interdisciplinary reviews: WIREs RNA 14 (1), e1734 (2023)
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Schindler, M.; Osterwalder, M.; Harabula, I.; Wittler, L.; Tzika, A. C.; Dechmann, D. K. N.; Vingron, M.; Visel, A.; Haas, S.; Real, F. M.: Induction of kidney-related gene programs through co-option of SALL1 in mole ovotestes. Development 150 (17), dev201562 (2023)
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Smirnova, J.; Loerke, J.; Kleinau, G.; Schmidt, A.; Bürger, J.; Meyer, E. H.; Mielke, T.; Scheerer, P.; Bock, R.; Spahn, C. M. T. et al.; Zoschke, R.: Structure of the actively translating plant 80S ribosome at 2.2 Å resolution. Nature Plants 9 (6), pp. 987 - 1000 (2023)
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Thesis - PhD (16)

Thesis - PhD
Mitra, D.: Utilizing alignment-free methods to enable quantitative gene expression analysis of large collections of sequencing data. Dissertation (2023)
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Thesis - PhD
Pacini, G.: Transcriptome regulation during the X chromosome inactivation process. Dissertation (2023)
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Thesis - PhD
Iyer, D.: The molecular landscape of developmental pausing in mammals. Dissertation (2023)
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