The following publications were published exclusively under the affiliation of the Max Planck Society. For publications by the principal investigator outside of the Max Planck Society, see the links on the lower left.

Journal Article (94)

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Gudmundsson, S.; Wilbe, M.; Filipek-Górniok, B.; Molin, A.-M.; Ekvall, S.; Johansson, J.; Allalou, A.; Gylje, H.; Kalscheuer, V. M.; Ledin, J. et al.; Annerén, G.; Bondeson, M.-L.: TAF1, associated with intellectual disability in humans, is essential for embryogenesis and regulates neurodevelopmental processes in zebrafish. Scientific Reports 9 (1), Article 10730 (2019)
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Seiler, E.; Trappe, K.; Renard, B. Y.: Where did you come from, where did you go: Refining metagenomic analysis tools for horizontal gene transfer characterisation. PLOS Computational Biology 15 (7), e1007208 (2019)
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Jönsson, M. E.; Brattas, P. L.; Gustafsson, C.; Petri, R.; Yudovich, D.; Pircs, K.; Verschuere, S.; Madsen, S.; Hansson, J.; Larsson, J. et al.; Mansson, R.; Meissner, A.; Jakobsson, J.: Activation of neuronal genes via LINE-1 elements upon global DNA demethylation in human neural progenitors. Nature Communications 10, 3182 (2019)
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Zi, Z.: Molecular Engineering of the TGF-β Signaling Pathway. Journal of Molecular Biology (London) 431 (15), pp. 2644 - 2654 (2019)
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Brandt, R.; Sell, T.; Lüthen, M.; Uhlitz, F.; Klinger, B.; Riemer, P.; Giesecke-Thiel, C.; Schulze, S.; El-Shimy, I. A.; Kunkel, D. et al.; Fauler, B.; Mielke, T.; Mages, N.; Herrmann, B. G.; Sers, C.; Blüthgen, N.; Morkel, M.: Cell type-dependent differential activation of ERK by oncogenic KRAS in colon cancer and intestinal epithelium. Nature Communications 10 (1), 2919 (2019)
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Barros de Andrade e Sousa, L.; Jonkers, I.; Syx, L.; Dunkel, I.; Chaumeil, J.; Picard, C.; Foret, B.; Chen, C.-J.; Lis, J. T.; Heard, E. et al.; Schulz, E. G.; Marsico, A.: Kinetics of Xist-induced gene silencing can be predicted from combinations of epigenetic and genomic features. Genome Research 29 (7), pp. 1087 - 1099 (2019)
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Hu, H.; Kahrizi, K.; Musante, L.; Fattahi, Z.; Herwig, R.; Hosseini, M.; Oppitz, C.; Abedini, S. S.; Suckow, V.; Farzaneh, L. et al.; Beheshtian, M.; Lipkowitz, B.; Akhtarkhavari, T.; Mehvari, S.; Otto, S.; Mohseni, M.; Arzhangi, S.; Jamali, P.; Mojahedi, F.; Taghdiri, M.; Papari, E.; Soltani Banavandi, M. J.; Akbari, S.; Tonekaboni, S. H.; Dehghani, H.; Ebrahimpou, M. R.; Bader, I.; Davarnia, B.; Cohen, M.; Khodaei, H.; Albrecht, B.; Azimi, S.; Zirn, B.; Bastami, M.; Wieczorek, D.; Bahrami, G.; Keleman, K.; Vahid, L. N.; Timmermann, B.; Pourfatemi, F.; Jankhah, A.; Chen, W.; Nikuei, P.; Kalscheuer, V. M.; Oladnabi, M.; Wienker, T. F.; Ropers, H.-H.; Najmabadi, H.: Genetics of intellectual disability in consanguineous families. Molecular Psychiatry 24 (7), pp. 1027 - 1039 (2019)
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van Heesch, S.; Witte, F.; Schneider-Lunitz, V.; Schulz, J. F.; Adami, E.; Faber, A. B.; Kirchner, M.; Maatz, H.; Blachut, S.; Sandmann, C. L. et al.; Kanda, M.; Worth, C. L.; Schafer, S.; Calviello, L.; Merriott, R.; Patone, G.; Hummel, O.; Wyler, E.; Obermayer, B.; Mucke, M. B.; Lindberg, E. L.; Trnka, F.; Memczak, S.; Schilling, M.; Felkin, L. E.; Barton, P. J. R.; Quaife, N. M.; Vanezis, K.; Diecke, S.; Mukai, M.; Mah, N.; Oh, S. J.; Kurtz, A.; Schramm, C.; Schwinge, D.; Sebode, M.; Harakalova, M.; Asselbergs, F. W.; Vink, A.; de Weger, R. A.; Viswanathan, S.; Widjaja, A. A.; Gartner-Rommel, A.; Milting, H.; Dos Remedios, C.; Knosalla, C.; Mertins, P.; Landthaler, M.; Vingron, M.; Linke, W. A.; Seidman, J. G.; Seidman, C. E.; Rajewsky, N.; Ohler, U.; Cook, S. A.; Hubner, N.: The Translational Landscape of the Human Heart. Cell 178 (1), pp. 242 - 260 (2019)
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De Bortoli, F.; Neumann, A.; Kotte, A.; Timmermann, B.; Schüler, T.; Wahl, M. C.; Loll, B.; Heyd, F.: Increased versatility despite reduced molecular complexity: evolution, structure and function of metazoan splicing factor PRPF39. Nucleic Acids Research (London) 47 (11), pp. 5867 - 5879 (2019)
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Robson, M. I.; Ringel, A. R.; Mundlos, S.: Regulatory Landscaping: How Enhancer-Promoter Communication Is Sculpted in 3D. Molecular Cell 74 (6), pp. 1110 - 1122 (2019)
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Arndt, P. F.: Sequential and continuous time stick-breaking. Journal of Statistical Mechanics: Theory and Experiment 6 (6), Article 064003 (2019)
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Paliou, C.; Guckelberger, P.; Schöpflin, R.; Heinrich, V.; Esposito, A.; Chiariello, A. M.; Bianco, S.; Annunziatella, C.; Helmuth, J.; Haas, S. et al.; Jerković, I.; Brieske, N.; Wittler, L.; Timmermann, B.; Nicodemi, M.; Vingron, M.; Mundlos, S.; Andrey, G.: Preformed Chromatin Topology Assists Transcriptional Robustness of Shh during Limb Development. Proceedings of the National Academy of Sciences of the United States of America 116 (25), pp. 12390 - 12399 (2019)
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Giesselmann, P.; Hetzel, S.; Müller, F.-J.; Meissner, A.; Kretzmer, H.: Nanopype: A modular and scalable nanopore data processing pipeline. Bioinformatics 35 (22), pp. 4770 - 4772 (2019)
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Ciusdel, C. F.; Coman, S.; Boldisor, C.; Kessler, T.; Muradyan, A.; Kovachev, A.; Lehrach, H.; Wierling, C.; Itu, L. M.: Effect of Linearization in a WNT Signaling Model. Computational and Mathematical Methods in Medicine, 8461820 (2019)
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Modic, M.; Grosch, M.; Rot, G.; Schirge, S.; Lepko, T.; Yamazaki, T.; Lee, F. C. Y.; Rusha, E.; Shaposhnikov, D.; Palo, M. et al.; Merl-Pham, J.; Cacchiarelli, D.; Rogelj, B.; Hauck, S. M.; von Mering, C.; Meissner, A.; Lickert, H.; Hirose, T.; Drukker, M.: Cross-Regulation between TDP-43 and Paraspeckles Promotes Pluripotency-Differentiation Transition. Molecular Cell 74 (5), pp. 951 - 965 (2019)
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Philippe, H.; Poustka, A. J.; Chiodin, M.; Hoff, K. J.; Dessimoz, C.; Tomiczek, B.; Schiffer, P. H.; Müller, S.; Domman, D.; Horn, M. et al.; Kuhl, H.; Timmermann, B.; Satoh, N.; Hikosaka-Katayama, T.; Nakano, H.; Rowe, M. L.; Elphick, M. R.; Thomas-Chollier, M.; Hankeln, T.; Mertes, F.; Wallberg, A.; Rast, J. P.; Copley, R. R.; Martinez, P.; Telford, M. J.: Mitigating Anticipated Effects of Systematic Errors Supports Sister-Group Relationship between Xenacoelomorpha and Ambulacraria. Current Biology 29 (11), e6, pp. 1818 - 1826 (2019)
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Beheshtian, M.; Fattahi, Z.; Fadaee, M.; Vazehan, R.; Jamali, P.; Parsimehr, E.; Kamgar, M.; Zonooz, M. F.; Mahdavi, S. S.; Kalhor, Z. et al.; Arzhangi, S.; Abedini, S. S.; Kermani , F. S.; Mojahedi, F.; Kalscheuer, V. M.; Ropers, H.-H.; Kariminejad , A.; Najmabadi, H.; Kahrizi, K.: Identification of disease-causing variants in the EXOSC gene family underlying autosomal recessive intellectual disability in Iranian families. Clinical Genetics: an international journal of genetics in medicine 95 (6), pp. 641 - 739 (2019)
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Chan, M. M.; Smith, Z. D.; Grosswendt, S.; Kretzmer, H.; Norman, T. M.; Adamson, B.; Jost, M.; Quinn, J. J.; Yang, D.; Jones, M. G. et al.; Khodaverdian, A.; Nir, Y.; Meissner, A.; Weissman, J. S.: Molecular recording of mammalian Embryogenesis. Nature 570 (7759), pp. 77 - 82 (2019)
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Berndt , N.; Eckstein, J.; Heucke, N.; Gajowski, R.; Stockmann, M.; Meierhofer, D.; Holzhütter, H.-G.: Characterization of Lipid and Lipid Droplet Metabolism in Human HCC. Cells 8 (5), 512 (2019)
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Bornemann, B.; Kovacs, P.; Singer, T.: Voluntary upregulation of heart rate variability through biofeedback is improved by mental contemplative training. Scientific Reports 9, 7860 (2019)
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