Search results

Journal Article (44)

21.
Journal Article
Cusack, B. P.; Arndt, P. F.; Duret, L.; Roest Crollius, H.: Preventing dangerous nonsense: selection for robustness to transcriptional error in human genes. PLoS Genet 7 (10), p. e1002276 (2011)
22.
Journal Article
Schutze, T.; Wilhelm, B.; Greiner, N.; Braun, H.; Peter, F.; Morl, M.; Erdmann, V. A.; Lehrach, H.; Konthur, Z.; Menger, M. et al.; Arndt, P. F.; Glokler, J.: Probing the SELEX Process with Next-Generation Sequencing. PLoS ONE 6 (12), p. e29604 - e29604 (2011)
23.
Journal Article
Zemojtel, T.; Kielbasa, S. M.; Arndt, P. F.; Behrens, S.; Bourque, G.; Vingron, M.: CpG deamination creates transcription factor-binding sites with high efficiency. Genome Biol Evol 3, pp. 1304 - 11 (2011)
24.
Journal Article
Schütze, T.; Arndt, P. F.; Menger, M.; Wochner, A.; Vingron, M.; Erdmann, V. A.; Lehrach, H.; Kaps, C.; Glökler, J.: A calibrated diversity assay for nucleic acid libraries using DiStRO-a Diversity Standard of Random Oligonucleotides. Nucleic Acids Research 38 (4), p. e23 - e23 (2010)
25.
Journal Article
Polak, P.; Querfurth, R.; Arndt, P. F.: The evolution of transcription-associated biases of mutations across vertebrates. BMC Evolutionary Biology 10, p. 10:187 - 10:187 (2010)
26.
Journal Article
Zemojtel, T.; Kielbasa, S. M.; Arndt, P. F.; Chung, H.-R.; Vingron, M.: Methylation and deamination of CpGs generate p53-binding sites on a genomic scale. Trends in Genetics 25 (2), pp. 63 - 66 (2009)
27.
Journal Article
Squartini, F.; Arndt, P. F.: Quantifying the stationarity and time reversibility of the nucleotide substitution process. Molecular Biology and Evolution 25 (12), pp. 2525 - 2535 (2008)
28.
Journal Article
Duret, L.; Arndt, P. F.: The Impact of Recombination on Nucleotide Substitutions in the Human Genome e1000071 (2008). PLoS Genetics 4 (5), p. e1000071 - e1000071 (2008)
29.
Journal Article
Polak, P.; Arndt, P. F.: Transcription induces strand-specific mutations at the 5? end of human genes. Genome Research 18 (8), pp. 1216 - 1223 (2008)
30.
Journal Article
Arndt, P. F.; Vingron, M.: The Otto Warburg International Summer School and Workshop on Networks and Regulation. BMC Bioinformatics 8 (Suppl) (6), p. S1 - S1 (2007)
31.
Journal Article
de la Chaux, N.; Messer, P. W.; Arndt, P.: DNA indels in coding regions reveal selective constraints on protein evolution in the human lineage. BMC Evolutionary Biology 7, pp. 191 - 102 (2007)
32.
Journal Article
Messer, P. W.; Bundschuh, R.; Vingron, M.; Arndt, P. F.: Effects of Long-Range Correlations in DNA on Sequence Alignment Score Statistics. Journal of Computational Biology: A Journal of Computational Molecular Cell Biology 14 (5), pp. 655 - 668 (2007)
33.
Journal Article
Messer, P. W.; Arndt, P. F.: The Majority of Recent Short DNA Insertions in the Human Genome Are Tandem Duplications. Molecular Biology and Evolution: MBE 24 (5), pp. 1190 - 1197 (2007)
34.
Journal Article
Messer, P. W.; Arndt, P. F.: CorGen-measuring and generating long-range correlations for DNA sequence analysis. Nucleic Acids Research 34, pp. W692 - W695 (2006)
35.
Journal Article
Lipatov1, M.; Arndt, P. F.; Hwa, T.; Petrov, D. A.: A novel method distinguishes between mutation rates and fixation biases in patterns of single-nucleotide substitution. Journal of Molecular Evolution: the Journal of the International Society of Molecular Evolution 62 (2), pp. 168 - 175 (2006)
36.
Journal Article
Roepcke, S.; Zhi, D.; Vingron, M.; Arndt, P. F.: Identification of highly specific localized sequence motifs in human ribosomal protein gene promoters. Gene 365, pp. 48 - 56 (2006)
37.
Journal Article
Messer, P.; Lässig, M.; Arndt, P. F.: Universality of long-range correlations in expansion-randomization systems. Journal of Statistical Mechanics: Theory and Experiment (10), p. P10004 - P10004 (2005)
38.
Journal Article
Arndt, P. F.; Hwa, T.; Petrov, D. A.: Substantial Regional Variation in Substitution Rates in the Human Genome: Importance of GC Content, Gene Density, and Telomere-Specific Effects. Journal of Molecular Evolution: the Journal of the International Society of Molecular Evolution 60(6) (6), pp. 748 - 763 (2005)
39.
Journal Article
Messer, P. W.; Arndt, P. F.; Lässig, M.: Solvable Sequence Evolution Models and Genomic Correlations. Physical Review Letters 94, pp. 138103-1 - 138103-4 (2005)
40.
Journal Article
Webster, M. T.; Smith, N. G. C.; Hultin-Rosenberg, L.; Arndt, P. F.; Ellegren, H.: Male-Driven Biased Gene Conversion Governs the Evolution of Base Composition in Human Alu Repeats. Molecular Biology and Evolution 22 (6), pp. 1468 - 1474 (2005)
Go to Editor View