Publications of Ewa Szczurek

Misra, N.; Szczurek, E.; Vingron, M.: Inferring the paths of somatic evolution in cancer. Bioinformatics 30 (17), pp. 2456 - 2463 (2014)

Szczurek, E.; Misra, N.; Vingron, M.: Synthetic sickness or lethality points at candidate combination therapy targets in glioblastoma. International Journal of Cancer 133 (9), pp. 2123 - 2132 (2013)

Jankowski, A.; Szczurek, E.; Jauch, R.; Tiuryn, J.; Prabhakar, S.: Comprehensive prediction in 78 human cell lines reveals rigidity and compactness of transcription factor dimers. Genome Research 23 (8), pp. 1307 - 1318 (2013)

Szczurek, E.; Markowetz, F.; Gat-Viks, I.; Biecek, P.; Tiuryn, J.; Vingron, M.: Deregulation upon DNA damage revealed by joint analysis of context-specific perturbation data. BMC Bioinformatics 12, p. 249 (2011)

Szczurek, E.; Biecek, P.; Tiuryn, J.; Vingron, M.: Introducing knowledge into differential expression analysis. Journal of Computational Biology 17 (8), pp. 953 - 967 (2010)

Roytberg, M.; Gambin,, A.; Noé, L.; Lasota, S.; Furletova, E.; Szczurek, E.; Kucherov, G.: On Subset Seeds for Protein Alignment. IEEE ACM Transactions on Computational Biology and Bioinformatics 6 (3), pp. 483 - 494 (2009)

Szczurek, E.; Gat-Viks, I.; Tiuryn, J.; Vingron, M.: Elucidating regulatory mechanisms downstream of a signaling pathway using informative experiments. Molecular Systems Biology 5, 2009.45 (2009)

Gambin, A.; Szczurek, E.; Dutkowski, J.; Bakun, M.; Dadlez, M.: Classification of peptide mass fingerprint data by novel no-regret boosting method. Computers in Biology and Medicine 39 (5), pp. 460 - 473 (2009)

Szczurek, E.: Modeling signal transduction pathways and their transcriptional response. Dissertation, Freie Universität Berlin, Berlin (2011)