Publikationen von Ralf Herwig

Zeitschriftenartikel (111)

Adjaye, J.; Herwig, R.; Herrmann, D.; Wruck, W.; BenKahla, A.; Brink, T. C.; Nowak, M.; Carnwath, J. W.; Hultschig, C.; Niemann, H. et al.; Lehrach, H.: Cross-species hybridisation of human and bovine orthologous genes on high density cDNA microarrays. BMC Genomics 5, S. 83 - 83 (2004)
Bauer, O.; Guerasimova, A.; Sauer, S.; Thamm, S.; Steinfath, M.; Herwig, R.; Janitz, M.; Lehrach, H.; Radelof, U.: Multiplexed hybridizations of positively charge-tagged peptide nucleic acids detected by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Rapid Communications in Mass Spectrometry 18 (16), S. 1821 - 1829 (2004)
Kahlem, P.; Sultan, M.; Herwig, R.; Steinfath, M.; Balzereit, D.; Eppens, B.; Saran, N. G.; Pletcher, M. T.; South, S. T.; Stetten, G. et al.; Lehrach, H.; Reeves, R. H.; Yaspo, M.-L.: Transcript level alterations reflect gene dosage effects across multiple tissues in a mouse model of Down Syndrome. Genome Research 14 (7), S. 1258 - 1267 (2004)
Dickmeis, T.; Plessy, C.; Rastegar, S.; Aanstad, P.; Herwig, R.; Chalmel, F.; Fischer, N.; Strähle, U.: Expression profiling and comparative genomics identify a conserved regulatory region controlling midline expression in the zebrafish embryo. Genome Research 14 (2), S. 228 - 238 (2004)
Poustka, A. J.; Groth, D.; Hennig, S.; Thamm, S.; Cameron, A.; Beck, A.; Reinhardt, R.; Herwig, R.; Panopoulou, G.; Lehrach, H.: Generation, annotation, evolutionary analysis, and database integration of 20,000 unique sea urchin EST clusters. Genome Research 13 (12), S. 2736 - 2746 (2003)
Dieterich, C.; Herwig, R.; Vingron, M.: Exploring potential target genes of signaling pathways by predicting conserved transcription factor binding sites. Bioinformatics 19 (Suppl. 2), S. ii50 - ii56 (2003)
Panopoulou, G.; Hennig, S.; Groth, D.; Krause, A.; Poustka, A. J.; Herwig, R.; Vingron, M.; Lehrach, H.: New evidence for genome-wide duplications at the origin of vertebrates using an amphioxus gene set and completed animal genomes. Genome Research 13 (6), S. 1056 - 1066 (2003)
Herwig, R.; Schulz, B.; Weisshaar, B.; Hennig, S.; Steinfath, M.; Drungowski, M.; Stahl, D.; Wruck, W.; Menze, A.; O'Brien, J. et al.; Lehrach, H.; Radelof, U.: Construction of a 'unigene' cDNA clone set by oligonucleotide fingerprinting allows access to 25 000 potential sugar beet genes. The Plant Journal 32 (5), S. 845 - 857 (2002)
Wierling, C. K.; Steinfath, M.; Elge, T.; Schulze-Kremer, S.; Aanstad, P.; Clark, M.; Lehrach, H.; Herwig, R.: Simulation of DNA array hybridization experiments and evaluation of critical parameters during subsequent image and data analysis. BMC Bioinformatics 3 (1), S. 29 - 29 (2002)
Gitton, Y.; Dahmane, N.; Baik, S.; i Altaba, A. R.; Neidhardt, L.; Scholze, M.; Herrmann, B. G.; Kahlem, P.; Benkhala, A.; Schrinner, S. et al.; Yildirimman, R.; Herwig, R.; Lehrach, H.; Yaspo, M.-L.: A gene expression map of human chromosome 21 orthologues in the mouse. Nature 420 (6917), S. 586 - 590 (2002)
Fuchs, T.; Malecova, B.; Linhart, C.; Sharan, R.; Khen, M.; Herwig, R.; Shmulevich, D.; Elkon, R.; Steinfath, M.; O'Brien, J. K. et al.; Radelof, U.; Lehrach, H.; Lancet, D.; Shamir, R.: DEFOG: A Practical Scheme for Deciphering Families of Genes. Genomics 80 (3), S. 295 - 302 (2002)

Buch (2)

Klipp, E.; Liebermeister, W.; Wierling, C.; Kowald, A.; Lehrach, H.; Herwig, R.: Systems Biology: A Textbook. Wiley-VCH, Weinheim (2009), XXI, 569 pp: Ill., graphs. S.
Klipp, E.; Herwig, R.; Kowald, A.; Wierling, C.; Lehrach, H.: Systems biology in practice: concepts, implementation and application. Wiley-VCH, Weinheim (2005), 466 pp S.

Buchkapitel (6)

Hoehe, M. R.; Herwig, R.: Analysis of 1276 Haplotype-Resolved Genomes Allows Characterization of Cis- and Trans-Abundant Genes. In: Haplotyping. Methods in Molecular Biology (Springer Protocols), Bd. 2590, S. 237 - 272 (Hg. Peters, B. A.; Drmanac, R.). Humana Press (Springer Science+Business Media, Springer-Verlag GmbH), New York, NY (2022)
Hebels, D. G.; Rasche, A.; Herwig, R.; van Westen, G. J.; Jennen, D. G.; Kleinjans, J. C.: A Systems Biology Approach for Identifying Hepatotoxicant Groups Based on Similarity in Mechanisms of Action and Chemical Structure. In: In Silico Methods for Predicting Drug Toxicity (Hg. Benfenati , E.) (2016)
Vilardell, M.; Herwig, R.: Predictive mechanisms in stem cells: an in vitro system based method for testing carcinogenicity. In: Handbook of Nanotoxicology, Nanomedicine and Stem Cell Use in Toxicology, S. 337 - 346 (Hg. Sahu, . C.; Casciano, D. A.). John Wiley & Sons, Ltd, Hoboken, NJ (2014)
Bauer, O.; Janitz, M.; Guerasimova, A.; Herwig, R.; Lehrach, H.; Radelof, U.: Oligonucleotide fingerprinting including differental cDNA library screning. In: Analysing gene expression. A handbook of methods: Possibilities and, S. 463 - 471 (Hg. Lorkowski, S.; Cullen, P.). Wiley-VCH, Weinheim (2002)
Herwig, R.; Lehrach, H.: Clustering gene expression profiles. In: Analysing gene expression. A handbook of methods: Possibilities and, S. 790 - 798 (Hg. Lorkowski, S.; Cullen, P.). Wiley-VCH, Weinheim (2002)
Herwig, R.; Schuchhardt, J.; Eickhoff, H.; Herzel, H.; Lehrach, H.: Datenanalyse von Biochips: Von der Sequenz zum System. In: Grundlagen der Molekularen Medizin, S. 360 - 387 (Hg. Ganten, D.; Ruckpaul, K.). Springer Verlag, Berlin [u.a.] (2002)

Konferenzband (1)

Reconstruction and validation of gene regulatory networks with neural networks. The 2nd Foundations of Systems Biology in Engineering Conference, FOSBE 2007, Stuttgart, 09. September 2007 - 12. September 2007. Universität Stuttgart, Stuttgart (2007), ? S.
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