Publikationen von Martin Vingron

Annkatrin Sarah Bressin, A Multi-Omics Analysis of Transcription Control by BRD4, PhD Thesis, 2023.

Lam-Ha Ly, Deciphering cellular heterogeneity by single-cell transcriptome analysis, PhD Thesis, 2022.

Philip Kleinert, Computational interpretation of disease-causing, structural, and non-coding human genetic variants, PhD Thesis, 2022.

Martyna Gajos, Analysis of the determinants of Pol II pausing, PhD Thesis, 2022.

Eldar Abdullaev, Dynamical Aspects of the Evolution of Segmental Duplications in the Human Genome, PhD Thesis, 2022.

Elzbieta Gralinska, Association Plots visualize cluster-specific genes from high-dimensional transcriptomics data, PhD Thesis, 2022.

Gal Barel, Network Propagation with Node Core for Genotype-Phenotype Associations and Module Identification, PhD Thesis, 2021.

Tobias Zehnder, Computational Approaches for the Prediction of Gene Regulatory Elements and the Analysis of their Evolutionary Conservation, PhD Thesis, 2021.

David Heller, Structural variant calling using third-generation sequencing data, PhD Thesis, 2021.

Mohammadhossein Moeinzadeh, De novo and haplotype assembly of polyploid genomes, PhD Thesis, 2019.

Anna Ramisch, Enhancer Prediction Based on Epigenomic Data, PhD Thesis, 2019.

Matthew R. Huska, Using machine learning to predict and better understand DNA methylation and genomic enhancers, PhD Thesis, Freie Universität, 2018.

Johannes Helmuth, Robust Normalization of Next Generation Sequencing Data, PhD Thesis, 2017.

Wolfgang Kopp, Statistical methods for motif hit enrichment in DNA sequences, PhD Thesis, 2017.

Pauline Hübner, Association Plots – A Method to Detect Tissue-Specific Regulatory Patterns?, Master Thesis, 2024.

Meghan Kane, Mathematical Modeling of High-Risk Viral Mutations, Master Thesis, 2024.

Sara Lopez Ruiz de Vargas, Adding 3D chromatin structure information to enhancer- target prediction with CENTRE, Master Thesis, 2024.

Ward Al Raei, Genotyping tandem repeats: Introducing Tandem Twister, a rapid and universal tool for long-read sequencing technologies, Master Thesis, 2024.

Wolfgang Huber, Anja von Heydebreck, and Martin Vingron, "Error models for microarray intensities", (2004).

Magdalena Schindler, Christian Feregrino, Silvia Aldrovandi, Bai-Wei Lo, Anna A. Monaco, Alessa R. Ringel, Ariadna Morales, Tobias Zehnder, Rose Yinghan Behncke, Juliane Glaser, Alexander Barclay, Guillaume Andrey, Bjørt K. Kragesteen, René Hägerling, Stefan Haas, Martin Vingron, Igor Ulitsky, Marc Marti-Renom, Julio Hechavarria, ProfileNicolas Fasel, Michael Hiller, Darío Lupiáñez, Stefan Mundlos, and Francisca M. Real, "Comparative single-cell analyses reveal evolutionary repurposing of a conserved gene program in bat wing development", in bioRxiv: the preprint server for biology, (2024).