Publikationen von Edda Klipp

Wolfram Liebermeister and Edda Klipp, "Bringing metabolic networks to life: integration of kinetic, metabolic, and proteomic data," Theoretical Biology & Medical Modelling 3, 42-42 (2006).

Wolfram Liebermeister and Edda Klipp, "Bringing metabolic networks to life: convenience rate law and thermodynamic constraints," Theoretical Biology & Medical Modelling 3, 41-41 (2006).

Zhike Zi and Edda Klipp, "SBML-PET: a Systems Biology Markup Language-based parameter estimation tool," Bioinformatics 22 (21), 2704-2705 (2006).

Edda Klipp and Wolfram Liebermeister, "Mathematical modeling of intracellular signaling pathways," BMC Neuroscience 7 (Suppl. 1), S10-S10 (2006).

Jörg Schaber, Bente Kofahl, Axel Kowald, and Edda Klipp, "A modelling approach to quantify dynamic crosstalk between the pheromone and the starvation pathway in baker's yeast," FEBS Journal 273 (15), 3520-3533 (2006).

Simon Borger, Wolfram Liebermeister, and Edda Klipp, "Prediction of enzyme kinetic parameters based on statistical learning," Genome Informatics 17 (1), 80-87 (2006).

Marvin Schulz, Jannis Uhlendorf, Edda Klipp, and Wolfram Liebermeister, "SBMLmerge, a System for Combining Biochemical Network Models," Genome Informatics 17 (1), 62-71 (2006).

Nicolas Le Novère, Andrew Finney, Michael Hucka, Upinder S. Bhalla, Fabien Campagne, Julio Collado-Vides, Edmund J. Crampin, Matt Halstead, Edda Klipp, Pedro Mendes, Poul Nielsen, Herbert Sauro, Bruce Shapiro, Jacky L. Snoep, Hugh D. Spence, and Barry L. Wanner, "Minimum information requested in the annotation of biochemical models (MIRIAM)," Nature Biotechnology 23 (12), 1509-1515 (2005).

Wolfram Liebermeister and Edda Klipp, "Biochemical networks with uncertain parameters," IEE Proceedings - Systems Biology 152 (3), 97-107 (2005).

Axel Kowald, Hans Lehrach, and Edda Klipp, "Alternative pathways as mechanism next term for the negative effects associated with overexpression of superoxide dismutase," Journal of Theoretical Biology (London) 238 (4), 828-840 (2005).

Wolfram Liebermeister, Ulrike Baur, and Edda klipp, "Biochemical network models simplified by balanced truncation," FEBS Journal 272 (16), 4034-4043 (2005).

Edda Klipp, Bodil Nordlander, Roland Krüger, Peter Gennemark, and Stefan Hohmann, "Integrative model of the response of yeast to osmotic shock," Nature Biotechnology 23 (8), 975-982 (2005).

Wolfram Liebermeister, Edda Klipp, Stefan Schuster, and Reinhart Heinrich, "A theory of optimal differential gene expression," Papers presented at the Fifth International Workshop on Information Processing in Cells and Tissues , 261-278 (2004).

Bente Kofahl and Edda Klipp, "Modelling the dynamics of the yeast pheromone pathway," Yeast 21 (10), 831-850 (2004).

Jörg Hakenberg, Sebastian Schmeier, Axel Kowald, Edda Klipp, and Ulf Leser, "Finding kinetic parameters using text mining," OMICS: A Journal of Integrative Biology 8 (2), 131-152 (2004).

Axel Kowald and Edda Klipp, "Alternative pathways might mediate toxicity of high concentrations of superoxide dismutase," Annals of the New York Academy of Sciences 1019, 370-374 (2004).

Edda Klipp, Wolfram Liebermeister, and Christoph Wierling, "Inferring dynamic properties of biochemical reaction networks from structural knowledge," Genome Informatics Series: Proceedings of the Workshop on Genome Informatics 15 (1), 125-137 (2004).

Edda Klipp, Bodil Nordlander, Bente Kofahl, and Stefan Hohmann, "Shutting the MAP off – and on again?," Current Genomics 5 (8), 637-647 (2004).

Edda Klipp, Reinhart Heinrich, and Hermann-Georg Holzhütter, "Prediction of temporal gene expression. Metabolic opimization by re-distribution of enzyme activities.," European Journal of Biochemistry 269 (22), 1432-1033 (2002).

Barbara M. Bakker, Heike E. Assmus, Frank Bruggeman, Jurgen R. Haanstra, Edda Klipp, and Hans Westerhoff, "Network-Based Selectivity of Antiparasitic Inhibitors," Molecular Biology Reports 29 (1 - 2), 1-5 (2002).