Publikationen von Ralf Herwig

Chris Bauer, Ralf Herwig, Matthias Lienhard, Paul Prasse, Tobias Scheffer, and Johannes Schuchhardt, "Large-scale literature mining to assess the relation between anti-cancer drugs and cancer types," Journal of Translational Medicine 19, 19:274 (2021).

Anna Cichońska, Balaguru Ravikumar, Robert J. Allaway, Fangping Wan, Sungjoon Park, Olexandr Isayev, Shuya Li, Michael Mason, Andrew Lamb, Ziaurrehman Tanoli, Minji Jeon, Sunkyu Kim, Mariya Popova, Stephen Capuzzi, Jianyang Zeng, Kristen Dang, Gregory Koytiger, Jaewoo Kang, Carrow I. Wells, Timothy M. Willson, Matthias Lienhard, Paul Prasse, Ivo Bachmann, Julia Ganzlin, Gal Barel, Ralf Herwig, Tudor I. Oprea, Avner Schlessinger, David H. Drewry, Gustavo Stolovitzky, Krister Wennerberg, Justin Guinney, and Tero Aittokallio, "Crowdsourced mapping of unexplored target space of kinase inhibitors," Nature Communications 12, 3307 (2021).

Sayeed Ur Rehman, Tanja Schallschmidt, Axel Rasche, Birgit Knebel, Torben Stermann, Delsi Altenhofen, Ralf Herwig, Annette Schürmann, Alexandra Chadt, and Hadi Al‑Hasani, "Alternative exon splicing and differential expression in pancreatic islets reveals candidate genes and pathways implicated in early diabetes development," Mammalian Genome 32 (3), 153-172 (2021).

Alexandra Farrall, Matthias Lienhard, Christina Grimm, Heiner Kuhl, Susanna H. M. Sluka, Marta Caparros Rodriguez, Jiri Forejt, Bernd Timmermann, Ralf Herwig, Bernhard G. Herrmann, and Markus Morkel, "PWD/Ph-encoded genetic variants modulate the cellular Wnt/β-Catenin response to suppress ApcMin-triggered intestinal tumor formation," Cancer research: an official organ of the American Association for Cancer Research 81 (1), 38-49 (2021).

Oleksiy Klymenko , Tim Brecklinghaus, Matthias Dille, Christian Springer, Christian de Wendt, Delsi Altenhofen, Christian Binsch, Birgit Knebel , Jürgen Scheller, Christopher Hardt, Ralf Herwig, Alexandra Chadt, Paul T. Pfluger, Hadi Al-Hasani, and Dhiraj G. Kabra, "Histone deacetylase 5 regulates Interleukin 6 secretion and insulin action in skeletal muscle," Molecular Metabolism 42, 101062 (2020).

Nathalie Selevsek, Florian Caiment, Ramona Nudischer, Hans Gmuender, Irina Agarkova, Francis L. Atkinson, Ivo Bachmann, Vanessa Baier, Gal Barel, Chris Bauer, Stefan Boerno, Nicolas Bosc, Olivia Clayton, Henrik Cordes, Sally Deeb, Stefano Gotta, Patrick Guye, Anne Hersey, Fiona M. I. Hunter, Laura Kunz, Alex Lewalle, Matthias Lienhard, Jort Merken, Jasmine Minguet, Bernardo Oliveira, Carla Pluess, Ugis Sarkans, Yannick Schrooders, Johannes Schuchhardt, Ines Smit, Christoph Thiel, Bernd Timmermann, Marcha Verheijen, Timo Wittenberger, Witold Wolski, Alexandra Zerck, Stephane Heymans, Lars Kuepfer, Adrian Roth, Ralph Schlapbach, Steven Niederer, Ralf Herwig, and Jos Kleinjans, "Network integration and modelling of dynamic drug responses at multi-omics levels," Communications Biology 3 (1), 573 (2020).

Gal Barel and Ralf Herwig, "NetCore: a network propagation approach using node coreness," Nucleic Acids Research 48 (17), e98 (2020).

Hao Hu, Kimia Kahrizi, Luciana Musante, Zohreh Fattahi, Ralf Herwig, Masoumeh Hosseini, Cornelia Oppitz, Seyedeh Sedigheh Abedini, Vanessa Suckow, Larti Farzaneh, Maryam Beheshtian, Bettina Lipkowitz, Tara Akhtarkhavari, Sepideh Mehvari, Sabine Otto, Marzieh Mohseni, Sanaz Arzhangi, Payman Jamali, Faezeh Mojahedi, Maryam Taghdiri, Elaheh Papari, Mohammad Javad Soltani Banavandi, Saeide Akbari, Seyed Hassan Tonekaboni, Hossein Dehghani, Mohammad Reza Ebrahimpou, Ingrid Bader, Behzad Davarnia, Monika Cohen, Hossein Khodaei, Beate Albrecht, Sarah Azimi, Birgit Zirn, Milad Bastami, Dagmar Wieczorek, Gholamreza Bahrami, Krystyna Keleman, Leila Nouri Vahid, Bernd Timmermann, Fatemeh Pourfatemi, Aria Jankhah, Wei Chen, Pooneh Nikuei, Vera M. Kalscheuer, Morteza Oladnabi, Thomas F. Wienker, Hans-Hilger Ropers, and Hossein Najmabadi, "Genetics of intellectual disability in consanguineous families," Molecular Psychiatry 24 (7), 1027-1039 (2019).

Peter Weibl and Ralf Herwig, "Superficial penile cancer treated with complete excision of the glans epithelium and coverage with a tissue sealant matrix (TachoSil®)," Central European Journal of Urology 72 (2), 2:204–208 (2019).

Joachim Greilberger, Michaela Greilberger, Thomas Petek, Philipp Stiegler, Bettina Leber, Herwig Reichl, Ashraf Kamel, and Ralf Herwig, "Effective Increase of Serum Vitamin D3 by IV Application of a Cholecalciferol-N-Acetyl-Galactosamine-Stabilized Dimer: a Clinical Murine Trial Study," Clinical Laboratory 65 (5), 181114 (2019).

Margret R. Hoehe, Ralf Herwig, Qing Mao , Brock A. Peters , Radoje Drmanac , George M. Church, and Thomas Huebsch, "Significant abundance of cis configurations of coding variants in diploid human genomes," Nucleic Acids Research 47 (6), 2981-2995 (2019).

M. Verheijen, M. Lienhard, Y. Schrooders, O. Clayton, R. Nudischer, S. T. Boerno, B. Timmermann, N. Selevsek, R. Schlapbach, H. Gmuender, S. Gotta, J. Geraedts, R. Herwig, J. Kleinjans, and F. Caiment, "DMSO induces drastic changes in human cellular processes and epigenetic landscape in vitro," Scientific Reports 9 (9), 4641 (2019).

Christina Grimm, Axel Fischer, Angela M. Farrelly, Roshni Kalachand, Roberta Castiglione, Elena Wasserburger, Michelle Hussong, Anne M. Schultheis, Janine Altmüller, Holger Thiele, Hans C. Reinhardt, Kai Hauschulz, Bryan T. Hennessy, Ralf Herwig, Matthias Lienhard, Reinhard Buettner, and Michal R. Schweiger, "Combined Targeted Re-Sequencing of Cytosine DNA Methylation and Mutations of DNA Repair Genes with Potential Use for PARP1 Inhibitor Sensitivity Testing," The Journal of Molecular Diagnostics 21 (2), 198-213 (2019).

C. Grimm, A. Fischer, A. M. Farrelly, R. Kalachand, R. Castiglione, E. Wasserburger, M. Hussong, A. M. Schultheis, J. Altmuller, H. Thiele, H. C. Reinhardt, K. Hauschulz, B. T. Hennessy, R. Herwig, M. Lienhard, R. Buettner, and M. R. Schweiger, "Combined Targeted Resequencing of Cytosine DNA Methylation and Mutations of DNA Repair Genes with Potential Use for Poly(ADP-Ribose) Polymerase 1 Inhibitor Sensitivity Testing," The Journal of Molecular Diagnostics 21 (2), 198-213 (2019).

Tanja Schallschmidt, Sandra Lebek, Delsi Altenhofen, Mareike Damen, Yvonne Schulte, Birgit Knebel, Ralf Herwig, Axel Rasche, Torben Stermann, Anne Kamitz, Nicole Hallahan, Markus Jähnert, Heike Vogel, Annette Schürmann, Alexandra Chadt, and Hadi Al-Hasani, "Identification of two novel candidate genes for insulin secretion by comparative genomics of multiple backcross populations," Genetics 210 (4), 1527-1542 (2018).

Gal Barel and Ralf Herwig, "Network and Pathway Analysis of Toxicogenomics Data," Frontiers in Genetics 9, 9:484 (2018).

M. C. T. Verheijen, Y. Schrooders, R. Nudischer, S. T. Börno, R. Schlapbach, S. Gotta, J. C. S. Kleinjans, M. Lienhard, O. Clayton, B. Timmermann, N. Selevsek, H. Gmuender, R. Herwig, and F. Caiment, "DMSO-induced drastic changes in cellular processes and epigenetic landscape in vitro," TOXICOLOGY LETTERS 2018, 295:S215 (2018).

Sabrina Grasse, Matthias Lienhard, Steffen Frese, Martin Kerick, Anne Steinbach, Christina Grimm, Michelle Hussong, Jana Rolff, Michael Becker, Felix Dreher, Uwe Schirmer, Stefan T. Boerno, Anna Ramisch, Gunda Leschber, Bernd Timmermann, Christian Grohé, Heike Lüders, Martin Vingron, Iduna Fichtner, Sebastian Klein, Margarete Odenthal, Reinhard Büttner, Hans Lehrach, Holger Sültmann, Ralf Herwig, and Ruth M. Schweiger, "Epigenomic profiling of non-small cell lung cancer xenografts uncover LRP12 DNA methylation as predictive biomarker for carboplatin resistance," Genome Medicine 10 (1), 10:55 (2018).

L. Kuepfer, O. Clayton, C. Thiel, H. Cordes, R. Nudischer, L. M. Blank, V. Baier, S. Heymans, F. Caiment, A. Roth, D. A. Fluri, J. M. Kelm, J. Castell, N. Selevsek, R. Schlapbach, H. Keun, J. Hynes, U. Sarkans, H. Gmuender, R. Herwig, S. Niederer, J. Schuchhardt, M. Segall, and J. Kleinjans, "A model-based assay design to reproduce in vivo patterns of acute drug-induced toxicity," Archives of Toxicology 92 (1), 553-555 (2018).

Matthias Lienhard, Sabrina Grasse, Jana Rolff, Steffen Frese, Uwe Schirmer, Michael Becker, Stefan T. Börno, Bernd Timmermann, Lukas Chavez, Holger Sültmann, Gunda Leschber, Iduna Fichtner, Michal R. Schweiger, and Ralf Herwig, "QSEA – modelling of genome-wide DNA methylation from sequencing enrichment experiments," Nucleic Acids Research (London) 45 (6), e44 (2017).