Publikationen von Pay Gießelmann

Alexandro Landshammer, Adriano Bolondi, Helene Kretzmer, Christian Much, Rene Buschow, Alina Rose, Hua-Jun Wu, Sebastian D. Mackowiak, Bjoern Braendl, Pay Gießelmann, Rosaria Tornisiello, Krishna Mohan Parsi, Jack Huey, Thorsten Mielke, David Meierhofer, René Maehr, Denes Hnisz, Franziska Michor, John L. Rinn, and Alexander Meissner, "T-REX17 is a transiently expressed non-coding RNA essential for human endoderm formation," eLife 12, e83077 (2023).

Alexandro Landshammer, Adriano Bolondi, Helene Kretzmer, Christian Much, Rene Buschow, Alina Rose, Hua-Jun Wu, Sebastian Mackowiak, Bjoern Braendl, Pay Giesselmann, Rosaria Tornisiello, Krishna Mohan Parsi, Jack Huey, Thorsten Mielke, David Meierhofer, René Maehr, Denes Hnisz, Franziska Michor, John L. Rinn, and Alexander Meissner, "Discovery and characterization of LNCSOX17 as an essential regulator in human endoderm formation," bioRxiv (Preprint Server) (2022).

Sara Hetzel, Pay Gießelmann, Knut Reinert, Alexander Meissner, and Helene Kretzmer, "RLM: Fast and simplified extraction of Read-Level Methylation metrics from bisulfite sequencing data," Bioinformatics 37 (21), 3934-3935 (2021).

Chuck Haggerty, Helene Kretzmer, Christina Riemenschneider, Abhishek Sampath Kumar, Alexandra L. Mattei, Nina Bailly, Judith Gottfreund, Pay Giesselmann, Raha Weigert, Björn Brändl, Pascal Giehr, Rene Buschow, Christina Galonska, Ferdinand von Meyenn, Melissa B. Pappalardi, Michael T. McCabe, Lars Wittler, Claudia Giesecke-Thiel, Thorsten Mielke, David Meierhofer, Bernd Timmermann, Franz-Josef Müller, Jörn Walter, and Alexander Meissner, "Dnmt1 has de novo activity targeted to transposable elements," Nature Structural and Molecular Biology 28 (7), 594-603 (2021).

Jocelyn Charlton, Eunmi J. Jung, Alexandra L. Mattei, Nina Bailly, Jing Liao, Eric J. Martin, Pay Gießelmann, Björn Brändl, Elena K. Stamenova, Franz-Josef Müller, Evangelos Kiskinis, Andreas Gnirke, Zachary D. Smith, and Alexander Meissner, "TETs compete with DNMT3 activity in pluripotent cells at thousands of methylated somatic enhancers," Nature Genetics 52 (8), 819-827 (2020).

Pay Gießelmann, Björn Brändl, Etienne Raimondeau, Rebecca Bowen, Christian Rohrandt, Rashmi Tandon, Helene Kretzmer, Günter Assum, Christina Galonska, Reiner Siebert, Ole Ammerpohl, Andrew Heron, Susanne A. Schneider, Julia Ladewig, Philipp Koch, Bernhard M. Schuldt, James E. Graham, Alexander Meissner, and Franz-Josef Müller, "Analysis of short tandem repeat expansions and their methylation state with nanopore sequencing," Nature Biotechnology 37 (12), 1478-1481 (2019).

Pay Giesselmann, Sara Hetzel, Franz-Josef Müller, Alexander Meissner, and Helene Kretzmer, "Nanopype: A modular and scalable nanopore data processing pipeline," Bioinformatics 35 (22), 4770-4772 (2019).

Christian Rohrandt, Nadine Kraft, Pay Gießelmann, Björn Brändl, Bernhard M. Schuldt, Ulrich Jetzek, and Franz-Josef Müller, "Nanopore SimulatION – a raw data simulator for Nanopore Sequencing", in 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), (2019), pp. 1536 -1543.