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Journal Article (7)

  1. 1.
    Journal Article
    Schöne, S.; Bothe, A. M.; Einfeldt, E.; Borschiwer, M.; Benner, P. F.; Vingron, M.; Thomas-Chollier, M.; Meijsing, S. H.: Synthetic STARR-seq reveals how DNA shape and sequence modulate transcriptional output and noise. PLoS Genetics 14 (11) (2018)
  2. 2.
    Journal Article
    Thomas-Chollier, M.; Watson, L. C.; Cooper, S. B.; Pufall, M. A.; Liu, J. S.; Borzym, K.; Vingron, M.; Yamamoto, K. R.; Meijsing, S. H.: A naturally occuring insertion of a single amino acid rewires transcriptional regulation by glucocorticoid receptor isoforms. Proceedings of the National Academy of Sciences of the United States of America 110 (44), pp. 17826 - 17831 (2013)
  3. 3.
    Journal Article
    Thomas-Chollier, M.; Darbo, E.; Herrmann, C.; Defrance, M.; Thieffry, D.; van Helden, J.: A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs. Nature Protocols 7 (8) (2012)
  4. 4.
    Journal Article
    Thomas-Chollier, M.; Herrmann, C.; Defrance, M.; Sand, O.; Thieffry, D.; van Helden, J.: RSAT peak-motifs: motif analysis in full-size ChIP-seq datasets. Nucleic Acids Research (London) 40 (4), p. e31 - e31 (2012)
  5. 5.
    Journal Article
    Thomas-Chollier, M.; Defrance, M.; Medina-Rivera, A.; Sand, O.; Herrmann, C.; Thieffry, D.; van Helden, J.: RSAT 2011: regulatory sequence analysis tools. Nucleic Acids Res 39 (Web Server issue), pp. W86 - 91 (2011)
  6. 6.
    Journal Article
    Thomas-Chollier, M.; Herrmann, C.; Defrance, M.; Sand, O.; Thieffry, D.; van Helden, J.: RSAT peak-motifs: motif analysis in full-size ChIP-seq datasets. Nucleic Acids Res (2011)
  7. 7.
    Journal Article
    Thomas-Chollier, M.; Hufton, A.; Heinig, M.; O'Keeffe, S.; Masri, N. E.; Roider, H. G.; Manke, T.; Vingron, M.: Transcription factor binding predictions using TRAP for the analysis of ChIP-seq data and regulatory SNPs. Nat Protoc 6 (12), pp. 1860 - 9 (2011)
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