Publications

Veenvliet, J. V.; Bolondi, A.; Kretzmer, H.; Haut, L.; Scholze-Wittler, M.; Schifferl, D.; Koch, F.; Guignard, L.; Sampath Kumar, A.; Pustet, M. et al.; Heimann, S.; Buschow, R.; Wittler, L.; Timmermann, B.; Meissner, A.; Herrmann, B. G.: Mouse embryonic stem cells self-organize into trunk-like structures with neural tube and somites. Science 370 (6522), eaba4937 (2020)

Riege, K.; Kretzmer, H.; Sahm, A.; McDade, S. S.; Hoffmann, S.; Fischer, M.: Dissecting the DNA binding landscape and gene regulatory network of p63 and p53. eLife 9, e63266 (2020)

Grosswendt, S.; Kretzmer, H.; Smith, Z. D.; Sampath Kumar, A.; Hetzel, S.; Wittler, L.; Klages, S.; Timmermann, B.; Mukherji, S.; Meissner, A.: Epigenetic regulator function through mouse gastrulation. Nature 584 (7819), pp. 102 - 108 (2020)

Charlton, J.; Jung, E. J.; Mattei, A. L.; Bailly, N.; Liao, J.; Martin, E. J.; Gießelmann, P.; Brändl, B.; Stamenova, E. K.; Müller, F.-J. et al.; Kiskinis, E.; Gnirke, A.; Smith, Z. D.; Meissner, A.: TETs compete with DNMT3 activity in pluripotent cells at thousands of methylated somatic enhancers. Nature Genetics 52 (8), pp. 819 - 827 (2020)

The ENCODE Project Consortium; Snyder, M. P.; Gingeras, T. R.; Moore, J. E.; Weng, Z.; Gerstein, M. B.; Ren, B.; Hardison, R. C.; Stamatoyannopoulos, J. A.; Graveley, B. R. et al.; Feingold, E. A.; Pazin, M. J.; Pagan, M.; Gilchrist, D. A.; Hitz, B. C.; Cherry, J. M.; Bernstein, B. E.; Mendenhall, E. M.; Zerbino, D. R.; Frankish, A.; Flicek, P.; Myers , R. M.; Meissner, A.: Perspectives on ENCODE. Nature 583, pp. 693 - 698 (2020)

Jaeger, M. G.; Schwalb, B.; Mackowiak, S. D.; Velychko, T.; Hanzl, A.; Imrichova, H.; Brand, M.; Agerer, B.; Chorn, S.; Nabet, B. et al.; Ferguson, F. M.; Müller, A. C.; Bergthaler, A.; Gray, N. S.; Bradner, J. E.; Bock, C.; Hnisz, D.; Cramer, P.; Winter, G. E.: Selective Mediator dependence of cell-type-specifying transcription. Nature Genetics 52 (7), pp. 719 - 727 (2020)

Yagi, M.; Kabata, M.; Tanaka, A.; Ukai, T.; Ohta, S.; Nakabayashi, K.; Shimizu, M.; Hata, K.; Meissner, A.; Yamamoto, T. et al.; Yamada, Y.: Identification of distinct loci for de novo DNA methylation by DNMT3A and DNMT3B during mammalian development. Nature Communications 11, 3199 (2020)

Basu, S.; Mackowiak, S.; Niskanen, H.; Knezevic, D.; Asimi, V.; Grosswendt, S.; Geertsema, H.; Ali, S.; Jerković, I.; Ewers, H. et al.; Mundlos, S.; Meissner, A.; Ibrahim, D. M.; Hnisz, D.: Unblending of Transcriptional Condensates in Human Repeat Expansion Disease. Cell 181 (5), pp. 1062 - 1079 (2020)

Popovitchenko, T.; Park, Y.; Page, N. F.; Luo, X.; Krsnik, Z.; Liu, Y.; Salamon, I.; Stephenson, J. D.; Kraushar, M.; et al: Translational derepression of Elavl4 isoforms at their alternative 5′ UTRs determines neuronal development. Nature Communications 11 (1), 1674 (2020)

Huyghe, A.; Furlan, G.; Ozmadenci, D.; Galonska, C.; Charlton, J.; Gaume, X.; Combémorel, N.; Riemenschneider, C.; Allègre, N.; Zhang, J. et al.; Wajda, P.; Rama, N.; Vieugué, P.; Durand, I.; Brevet , M.; Gadot, N.; Imhof, T.; Merrill , B. J.; Koch, M.; Mehlen, P.; Chazaud, C.; Meissner, A.; Lavial , F.: Netrin-1 promotes naive pluripotency through Neo1 and Unc5b co-regulation of Wnt and MAPK signalling. Nature Cell Biology 22 (4), pp. 389 - 400 (2020)

Gokhman, D.; Nissim-Rafinia, M.; Agranat-Tamir, L.; Housman, G.; García-Pérez, R.; Lizano, E.; Cheronet, O.; Mallick, S.; Nieves-Colón, M. A.; Li, H. et al.; Alpaslan-Roodenberg, S.; Novak, M.; Gu, H.; Osinski, J. M.; Ferrando-Bernal, M.; Gelabert, P.; Lipende, I.; Mjungu, D.; Kondova, I.; Bontrop, R.; Kullmer, O.; Weber, G.; Shahar, T.; Dvir-Ginzberg, M.; Faerman, M.; Quillen, E. E.; Meissner, A.; Lahav, Y.; Kandel, L.; Liebergall, M.; Prada, M. E.; Vidal, J. M.; Gronostajski, R. M.; Stone, A. C.; Yakir, B.; Lalueza-Fox, C.; Pinhasi, R.; Reich, D.; Marques-Bonet, T.; Meshorer, E.; Carmel, L.: Differential DNA methylation of vocal and facial anatomy genes in modern humans. Nature Communications 11, 1189 (2020)

Alvarez-Dominguez, J. R.; Donaghey, J.; Rasouli, N.; Kenty, J. H. R.; Helman, A.; Charlton, J.; Straubhaar, J. R.; Meissner, A.; Melton, D. A.: Circadian Entrainment Triggers Maturation of Human In Vitro Islets. Cell Stem Cell 26 (1), pp. 108 - 122 (2020)

Meissner, A.; Hirsch, C.; Fritz, G.; Adjaye, J.; Schupp, N.: iPSC differentiating into renal proximal tubular cells are vulnerable to oxidative stress. 27th Annual Conference of the Society-for-Redox-Biology-and-Medicine (SfRBM) (Virtual meeting), November 18, 2020 - November 20, 2020. Free Radical Biology and Medicine 159, pp. S109 - S110 (2020)

Klever, M.-K.; Sträng, E.; Jungnitsch, J.; Melo, U. S.; Hetzel, S.; Dolnik, A.; Schöpflin, R.; Schrezenmeier, J. F.; Blau, O.; Westermann, J. et al.; Döhner, K.; Schrezenmeier, H.; Spielmann, M.; Meissner, A.; Mundlos, S.; Bullinger, L.: Integration of Hi-C and Nanopore Sequencing for Structural Variant Analysis in AML with a Complex Karyotype: (Chromothripsis)². 62nd Annual Meeting and Exposition of the American Society of Hematology (ASH) (Virtual meeting), December 05, 2020 - December 08, 2020. Blood 136, Article 28, (2020)

Knisbacher, B. A.; Lin, Z.; Hahn, C. K.; Nadeu, F.; Duran-Ferrer, M.; Stevenson, K. E.; Tausch, E.; Barbera-Mourelle, A.; Dunford, A.; Anand, S. et al.; Delgado, J.; Hess, J. M.; Taylor-Weiner, A.; Kretzmer, H.; Bousquets Muñoz, P.; Shaughnessy, C. J.; Fernandes, S. M.; Sivina, M.; Rassenti, L. Z.; Meissner, A.; Wiestner, A. ....; Getz, G.: The CLL-1100 Project: Towards Complete Genomic Characterization and Improved Prognostics for CLL. 62nd Annual Meeting and Exposition of the American-Society-of-Hematology (ASH) (Virtual meeting), December 05, 2020 - December 08, 2020. Blood 136, Article 3, (2020)

Pan, H.; Renaud, L.; Chaligne, R.; Bloehdorn, J.; Tausch, E.; Mertens, D.; Fink, A.-M.; Fischer, K.; Zhang, C.; Betel , D. et al.; Gnirke, A.; Imielinski, M.; Moreaux , J.; Hallek, M.; Meissner, A.; Stilgenbauer, S.; Wu, C. J.; Elemento, O.; Landau, D. A.: Robust Discovery of Candidate DNA Methylation Cancer Drivers. 62nd Annual Meeting and Exposition of the American Society of Hematology (ASH) (Virtual meeting), December 05, 2020 - December 08, 2020. Blood 136, pp. 33 - 34 (2020)

Rossmann, M.; Hoi, K.; Chan, V.; Abraham, B.; Yang, S.; Mullahoo, J.; Papanastasiou, M.; Elia, I.; Vyas, S.; Nag, P. et al.; Sullivan, L.; Perlin, J.; Hagedorn, E.; Hetzel, S.; Weigert, R.; Warren, C.; Dorjsuren, B.; Custo Greig, E.; Adatto, I.; Cowan, C.; Schreiber, S.; Young, R.; Meissner, A.; Haigis, M.; Carr, S.; Zon, L.: Transcriptional regulation of mitochondrial metabolism by TIF1γ drives erythroid progenitor differentiation. 49th Annual Scientific Meeting of the ISEH - International Society for Experimental Hematology (Virtual Meeting), New York City, USA, August 19, 2020 - August 21, 2020. Experimental Hematology 88, S35, (2020)

McGuire, A. L.; Gabriel, S.; Tishkoff, S. A.; Wonkam, A.; Chakravarti, A.; Furlong, E. E. M.; Treutlein, B.; Meissner, A.; Chang, H. Y.; López-Bigas, N. et al.; Segal, E.; Kim, J.-S.: The road ahead in genetics and genomics. Nature Reviews Genetics 21 (10), pp. 581 - 596 (2020)