Zeitschriftenartikel (228)
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CRUP: a comprehensive framework to predict condition-specific regulatory units. Genome Biology: Biology for the Post-Genomic Era 42.
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35 (17), S. 2907 - 2915 (2019)
SVIM: Structural Variant Identification using Mapped Long Reads. Bioinformatics 43.
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26 (8), S. 846 - 865 (2019)
DNA Motif Match Statistics Without Poisson Approximation. Journal of Computational Biology 44.
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51 (8), S. 1263 - 1271 (2019)
Functional dissection of the Sox9-Kcnj2 locus identifies nonessential and instructive roles of TAD architecture. Nature Genetics 45.
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178 (1), e29, S. 242 - 260 (2019)
The Translational Landscape of the Human Heart. Cell 46.
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Preformed Chromatin Topology Assists Transcriptional Robustness of Shh during Limb Development. bioRxiv (Preprint Server) 47.
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15 (5), e8339 (2019)
Linking aberrant chromatin features in chronic lymphocytic leukemia to transcription factor networks. Molecular Systems Biology 48.
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Predicting enhancers in mammalian genomes using supervised hidden Markov models. BMC Bioinformatics 49.
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35 (6), S. 1009 - 1017 (2019)
The Distance Precision Matrix: computing networks from non-linear relationships. Bioinformatics 50.
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21 (3), S. 305 - 310 (2019)
Serial genomic inversions induce tissue-specific architectural stripes, gene misexpression and congenital malformations. Nature Cell Biology 51.
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23 (6), S. 900 - 904 (2018)
Esrrb Unlocks Silenced Enhancers for Reprogramming to Naive Pluripotency - Correction. Cell Stem Cell 52.
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16 (1), 138 (2018)
Classifying human promoters by occupancy patterns identifies recurring sequence elements, combinatorial binding, and spatial interactions. BMC Biology 53.
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14 (11), e1007793 (2018)
Synthetic STARR-seq reveals how DNA shape and sequence modulate transcriptional output and noise. PLoS Genetics 54.
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50 (10), S. 1463 - 1473 (2018)
Dynamic 3D chromatin architecture determines enhancer specificity and morphogenetic identity in limb development. Nature Genetics 55.
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24 (10), S. 2784 - 2794 (2018)
Dynamics of Transcription Regulation in Human Bone Marrow Myeloid Differentiation to Mature Blood Neutrophils. Cell Reports 56.
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14 (8), e1006372 (2018)
coTRaCTE predicts co-occurring transcription factors within cell-type specific enhancers. PLoS Computational Biology 57.
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23 (2), S. 266 - 275 (2018)
Esrrb Unlocks Silenced Enhancers for Reprogramming to Naive Pluripotency. Cell Stem Cell 58.
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10 (1), 10:55 (2018)
Epigenomic profiling of non-small cell lung cancer xenografts uncover LRP12 DNA methylation as predictive biomarker for carboplatin resistance. Genome Medicine 59.
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50 (5), S. 662 - 667 (2018)
Polymer physics predicts the effects of structural variants on chromatin architecture. Nature Genetics 60.
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46 (6), S. 2868 - 2882 (2018)
Genomic dissection of enhancers uncovers principles of combinatorial regulation and dynamic wiring of enhancer-promoter contacts. Nucleic Acids Research (London)