Publications

Journal Article

Vilà-González, M.; Pinte, L.; Fradique, R.; Causa, E.; Kool, H.; Rodrat, M. ....; Vallier, L.: In vitro platform to model the function of ionocytes in the human airway epithelium. Respiratory Research 25 (1), Article 38664797 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Baudic, M.; Murata, H.; Bosada, F. M.; Melo, U. S.; Aizawa, T. e. a.: TAD boundary deletion causes PITX2-related cardiac electrical and structural defects. Nature Communications 15 (1), Article 3380 (2024)

MPG.PuRe

publisher-version

Journal Article

Rosebrock, D.; Vingron, M.; Arndt, P. F.: Modeling gene expression cascades during cell state transitions. iScience 27 (4), Article 109386 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Phan, M. H. Q.; Zehnder, T.; Puntieri, F.; Lo, B.-W.; Lenhard, B.; Mueller, F.; Vingron, M.; Ibrahim, D. M.: Conservation of Regulatory Elements with Highly Diverged Sequences Across Large Evolutionary Distances. bioRxiv (2024)

MPG.PuRe

DOI

pre-print

Journal Article

Rrustemi, T.; Meyer, K.; Roske , Y.; Uyar , B.; Akalin, A.; Imami, K.; Ishihama, Y.; Daumke , O.; Selbach, M.: Pathogenic mutations of human phosphorylation sites affect protein-protein interactions. Nature Communications 15 (1), Article 3146 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Maier, H. B.; Neyazi, A.; Bundies, G. L.; Meyer-Bockenkamp, F.; Bleich, S.; Pathak, H.; Ziert, Y.; Neuhaus, B.; Müller, F.-J.; Pollmann, I. e. a. et al.; Frieling, H.: Validation of the predictive value of BDNF -87 methylation for antidepressant treatment success in severely depressed patients-a randomized rater-blinded trial. Trials 25 (1), Article 247 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Bastian, L.; Beder, T.; Barz, M. J.; Bendig, S.; Bartsch, L.; Walter, W.; Wolgast , N.; Brändl, B.; Rohrandt, C.; Hansen, B.-T. et al.; Hartmann, A. M.; Iben, K.; das Gupta, D.; Denker, M.; Zimmermann , J.; Wittig, M.; Chitadze, G.; Neumann, M.; Schneller, F.; Fiedler, W.; Steffen, B.; Stelljes, M.; Faul, C.; Schwartz, S.; Müller, F.-J.; Cario, G.; Harder, L.; Haferlach, C.; Pfeifer, H.; Gökbuget, N.; Brüggemann, M.; Baldus, C. D.: Developmental trajectories and cooperating genomic events define molecular subtypes of BCR::ABL1-positive ALL. Blood 143 (14), pp. 1391 - 1398 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Ibrahim, D. M.: Enhancer contacts during embryonic development show diverse interaction modes and modest yet significant increases upon gene activation. Nature Genetics 56 (4), pp. 558 - 560 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Kudrin, P.; Singh, A.; Meierhofer, D.; Kuśnierczyk, A.; Ørom, U. A. V.: N4-acetylcytidine (ac4C) promotes mRNA localization to stress granules. EMBO Reports 25 (4), pp. 1814 - 1834 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Künzel, S. E.; Pompös, I.-M.; Flesch, L. T. M.; Frentzel, D. P.; Knecht, V. A.; Winkler, S.; Skosyrski, S.; Rübsam, A.; Dreher, F.; Kociok, N. et al.; Schütte, M.; Dubrac, A.; Lange, B.; Yaspo, M.-L.; Lehrach, H.; Strauß, O.; Joussen, A. M.; Zeitz, O.: Exploring the Impact of Saccharin on Neovascular Age-Related Macular Degeneration: A Comprehensive Study in Patients and Mice. Investigative Ophthalmology and Visual Science 65 (4), Article 5 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Sheinman, M.; Arndt, P. F.; Massip, F.: Modeling the mosaic structure of bacterial genomes to infer their evolutionary history. PNAS 121 (13), Article e2313367121 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Raaz, L.; Mendez, P.-L.; Mundlos, S.; Knaus, P.; Jatzlau, J.: Protocol for chromatin accessibility profiling of human endothelial cells cultured under fluid shear stress using ATAC-seq. STAR Protocols 5 (1), Article 102859 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Hauswedell , H.; Hetzel, S.; Gottlieb , S. G.; Kretzmer, H.; Meissner, A.; Reinert, K.: Lambda3: homology search for protein, nucleotide, and bisulfite-converted sequences. Bioinformatics 40 (3), Article btae097 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Kanczok, J.; Jauch-Chara, K.; Müller, F.-J.: Imagery rescripting and cognitive restructuring for inpatients with moderate and severe depression - a controlled pilot study. BMC Psychiatry 24 (1), Article 194 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Rüegg, A. B.; van der Weijden, V. A.; de Sousa, J. A.; von Meyenn, F.; Pausch, H.; Ulbrich, S. E.: Developmental progression continues during embryonic diapause in the roe deer. Communications Biology 7 (1), 270 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Lo, B.-W.; Martinez Real, F.; Magg, A.; Wise, J.; Mundlos, S.; Franchini, P.: Genome-wide demographic analyses of balaenid whales revealed complex history of gene flow associated with past climate oscillation. bioRxiv (2024)

MPG.PuRe

DOI

Journal Article

Nakanoh, S.; Sham, K.; Ghimire, S.; Mohorianu, I.; Rayon, T.; Vallier, L.: Human surface ectoderm and amniotic ectoderm are sequentially specified according to cellular density. Science Advances 10 (9), Article eadh7748 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Radke, J.; Meinhardt, J.; Aschman, T. e. a.; Timmermann, B.; Fernandez-Zapata, C.; Böttcher, C.; Stenzel, W.; Krüger, E.; Landthaler, M.; Wyler, E. et al.; Corman, V.; Stadelmann, C.; Ralser, M.; Eils, R.; Heppner, F. L.; Mülleder, M.; Conrad, C.; Radbruch, H.: Proteomic and transcriptomic profiling of brainstem, cerebellum and olfactory tissues in early- and late-phase COVID-19. Nature Neuroscience 27 (3), pp. 409 - 420 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

White, M. E. H.; Sinn, L. R.; Jones, D. M. e. a.; Ralser, M.: Oxonium ion scanning mass spectrometry for large-scale plasma glycoproteomics. Nature Biomedical Engineering 8 (3), pp. 233 - 247 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article

Ilik, I. A.; Glažar, P.; Tse, K.; Brändl, B.; Meierhofer, D.; Müller, F.-J.; Smith, Z. D.; Aktas, T.: Autonomous transposons tune their sequences to ensure somatic suppression. Nature 626 (8001), pp. 1116 - 1124 (2024)

MPG.PuRe

DOI

publisher-version

Journal Article (3386)