Publications of Alexander Meissner

Choi, J.; Clement, K.; Huebner, A. J.; Webster, J.; Etchegaray, J.-P.; Gu, H.; Boyle, P.; Elling, U.; Mostoslavsky, R.; Sadreyev, R. et al.; Park, P. J.; Gygi, S. P.; Meissner, A.; Hochedlinger, K.: DUSP9 Modulates DNA Hypomethylation in Female Mouse Pluripotent Stem Cells. Cell Stem Cell 20 (5), pp. 706 - 719 (2017)

Warren, C. R.; O’Sullivan, J. F.; Friesen, M.; Becker, C. E.; Zhang, X.; Liu, P.; Wakabayashi, Y.; Morningstar, J. E.; Shi, X.; Choi, J. et al.; Xia, F.; Peters, D. T.; Florido, M. H. C.; Tsankov, A. M.; Duberow, E.; Comisar, L.; Shay, J.; Jiang, X.; Meissner, A.; Musunuro, K.; Kathiresan, S.; Daheron, L.; Zhu, J.; Gerszten, R. E.; Deo, R. C.; Vasan, R. S.; O’Donnell, C. J.; Cowan, C. A.: Induced Pluripotent Stem Cell Differentiation Enables Functional Validation of GWAS Variants in Metabolic Disease. Cell Stem Cell 20 (4), pp. 547 - 557 (2017)

Yu , V. W. C.; Yusuf , R. Z.; Oki , T.; Wu, J.; Saez, B.; Wang, X.; Cook , C.; Baryawno , N.; Ziller , M. J.; Lee , E. et al.; Gu, H.; Meissner, A.; Lin, C. P.; Kharchenko, P. V.; Scadden , D. T.: Correction: Epigenetic Memory Underlies Cell-Autonomous Heterogeneous Behavior of Hematopoietic Stem Cells. Cell 168 (5), pp. 944 - 945 (2017)

Liu , L. L.; Brumbaugh , J.; Bar-Nur , O.; Smith , Z.; Stadtfeld , M.; Meissner, A.; Hochedlinger, K.; Michor, F.: Probabilistic Modeling of Reprogramming to Induced Pluripotent Stem Cells. Cell Reports 17 (12), pp. 3395 - 3406 (2016)

Ziller, M. J.; Stamenova, E. K.; Gu, H.; Gnirke, A.; Meissner, A.: Targeted bisulfite sequencing of the dynamic DNA methylome. Epigenetics & Chromatin 9, 9:55 (2016)

Kottakis, F.; Nicolay, B. N.; Roumane, A.; Karnik, R.; Gu, H.; Nagle, J. M.; Boukhali, M.; Hayward, M. C.; Li, Y. Y.; Chen, T. et al.; Liesa, M.; Hammerman, P. S.; Wong, K. K.; Hayes, D. N.; Shirihai, O. S.; Dyson, N. J.; Haas, W.; Meissner, A.; Bardeesy, N.: LKB1 loss links serine metabolism to DNA methylation and tumorigenesis. Nature 539 (7629), pp. 390 - 395 (2016)

Yu , V. W. C.; Yusuf , R. Z.; Oki , T.; Wu, J.; Saez, B.; Wang, X.; Cook , C.; Baryawno , N.; Ziller , M. J.; Lee , E. et al.; Gu, H.; Meissner, A.; Lin, C. P.; Kharchenko, P. V.; Scadden , D. T.: Epigenetic Memory Underlies Cell-Autonomous Heterogeneous Behavior of Hematopoietic Stem Cells. Cell 167 (5), e17, pp. 1310 - 1322 (2016)

Aguilar, C. A.; Pop, R.; Shcherbina, A.; Watts, A.; Matheny Jr., R. W.; Cacchiarelli, D.; Han, W. M.; Shin, E.; Nakhai, S. A.; Jang, Y. C. et al.; Carrigan, C. T.; Gifford, C. A.; Kottke, M. A.; Cesana, M.; Lee, J.; Urso, M. L.; Meissner, A.: Transcriptional and Chromatin Dynamics of Muscle Regeneration after Severe Trauma. Stem Cell Reports 7 (5), pp. 983 - 997 (2016)

Libertini, E.; Heath, S. C.; Hamoudi, R. A.; Gut, M.; Ziller, M. J.; Herrero, J.; Czyz, A.; Ruotti, V.; Stunnenberg, H. G.; Frontini, M. et al.; Ouwehand, W. H.; Meissner, A.: Saturation analysis for whole-genome bisulfite sequencing data. Nature Biotechnology 34 (7), pp. 691 - 693 (2016)

Libertini, E.; Heath, S. C.; Hamoudi, R. A.; Gut, M.; Ziller, M. J.; Czyz, A.; Ruotti, V.; Stunnenberg, H. G.; Frontini, M.; Ouwehand, W. H. et al.; Meissner, A.: Information recovery from low coverage whole-genome bisulfite sequencing. Nature Communications 2016, 7:11306 (2016)

Smith, Z. D.; Sindhu, C.; Meissner, A.: Molecular features of cellular reprogramming and development. Nature Reviews Molecular Cell Biology 17 (3), pp. 139 - 154 (2016)

Li, Z.; Peluffo, G.; Stevens, L.; Qiu, X.; Seehawer, M.; Huang, X.-Y.; Egri, S.; Papanastasiou, M.; Kingston, N.; D'Santos, C. et al.; Papachristou, E.; Nishida, J.; Evans, K.; Seo, J.-H.; Clement, K.; Temko, D.; Ekram, M.; Rees, M.; Ronan, M.; Roth, J.; Simeonov, A.; Kales, S.; Rai, G.; Lal-Nag, M.; Maloney, D.; Jadhav, A.; Michor, F.; Meissner, A.; Balko, J.; Carroll, J.; Freedman, M.; Long, H.; Jaffe, J.; Polyak, K.: KDM4C histone demethylase connects redox balance to chromatin remodeling via histone H3 tail clipping. AACR Special Conference on Cancer Research - Advances in Breast Cancer Research, San Diego, CA, October 19, 2023 - October 22, 2023. Cancer Research 84 (Suppl. 1), Article B008, (2024)

Meissner, A.; Hirsch, C.; Fritz, G.; Adjaye, J.; Schupp, N.: iPSC differentiating into renal proximal tubular cells are vulnerable to oxidative stress. 27th Annual Conference of the Society-for-Redox-Biology-and-Medicine (SfRBM) (Virtual meeting), November 18, 2020 - November 20, 2020. Free Radical Biology and Medicine 159, pp. S109 - S110 (2020)

Klever, M.-K.; Sträng, E.; Jungnitsch, J.; Melo, U. S.; Hetzel, S.; Dolnik, A.; Schöpflin, R.; Schrezenmeier, J. F.; Blau, O.; Westermann, J. et al.; Döhner, K.; Schrezenmeier, H.; Spielmann, M.; Meissner, A.; Mundlos, S.; Bullinger, L.: Integration of Hi-C and Nanopore Sequencing for Structural Variant Analysis in AML with a Complex Karyotype: (Chromothripsis)². 62nd Annual Meeting and Exposition of the American Society of Hematology (ASH) (Virtual meeting), December 05, 2020 - December 08, 2020. Blood 136, S28, (2020)

Knisbacher, B. A.; Lin, Z.; Hahn, C. K.; Nadeu, F.; Duran-Ferrer, M.; Stevenson, K. E.; Tausch, E.; Barbera-Mourelle, A.; Dunford, A.; Anand, S. et al.; Delgado, J.; Hess, J. M.; Taylor-Weiner, A.; Kretzmer, H.; Bousquets Muñoz, P.; Shaughnessy, C. J.; Fernandes, S. M.; Sivina, M.; Rassenti, L. Z.; Meissner, A.; Wiestner, A. ....; Getz, G.: The CLL-1100 Project: Towards Complete Genomic Characterization and Improved Prognostics for CLL. 62nd Annual Meeting and Exposition of the American-Society-of-Hematology (ASH) (Virtual meeting), December 05, 2020 - December 08, 2020. Blood 136, S3, (2020)

Pan, H.; Renaud, L.; Chaligne, R.; Bloehdorn, J.; Tausch, E.; Mertens, D.; Fink, A.-M.; Fischer, K.; Zhang, C.; Betel , D. et al.; Gnirke, A.; Imielinski, M.; Moreaux , J.; Hallek, M.; Meissner, A.; Stilgenbauer, S.; Wu, C. J.; Elemento, O.; Landau, D. A.: Robust Discovery of Candidate DNA Methylation Cancer Drivers. 62nd Annual Meeting and Exposition of the American Society of Hematology (ASH) (Virtual meeting), December 05, 2020 - December 08, 2020. Blood 136, pp. 33 - 34 (2020)

Rossmann, M.; Hoi, K.; Chan, V.; Abraham, B.; Yang, S.; Mullahoo, J.; Papanastasiou, M.; Elia, I.; Vyas, S.; Nag, P. et al.; Sullivan, L.; Perlin, J.; Hagedorn, E.; Hetzel, S.; Weigert, R.; Warren, C.; Dorjsuren, B.; Custo Greig, E.; Adatto, I.; Cowan, C.; Schreiber, S.; Young, R.; Meissner, A.; Haigis, M.; Carr, S.; Zon, L.: Transcriptional regulation of mitochondrial metabolism by TIF1γ drives erythroid progenitor differentiation. 49th Annual Scientific Meeting of the ISEH - International Society for Experimental Hematology (Virtual Meeting), New York City, USA, August 19, 2020 - August 21, 2020. Experimental Hematology 88, S35, (2020)

Kubelt , C.; Brändl , B.; van Bömmel , A.; Rohrandt, C.; Wang, G.; Evers , M.; Kolkenbrock , S.; Wong, D.; Danso, D.; Maicher, A. et al.; Friedrichsen , S.; Proescholdt , M.; Riemenschneider , M.; Jetzek, U.; Meissner, A.; Yip , S.; Kretzmer, H.; Synowitz, M.; Müller, F.-J.: INTRAEPIGLIOM - RAPID SEQUENCING-BASED DIAGNOSIS OF BRAIN TUMORS. 27th Annual Scientific Meeting and Education Day of the Society-for-Neuro-Oncology (SNO), Tampa, FL, November 16, 2022 - November 20, 2022. Neuro-Oncology: official journal of the World Federation of Neuro-Oncology 24, Suppl. 7 Ed., pp. 160 - 161 (2022)

Smith, Z. D.; Hetzel, S.; Meissner, A.: DNA methylation in mammalian development and disease. Nature Reviews Genetics 26 (1), pp. 7 - 30 (2025)

Bolondi, A.; Kretzmer, H.; Meissner, A.: Single-cell technologies: a new lens into epigenetic regulation in development. Current Opinion in Genetics & Development 76, 101947 (2022)