Publications of Martin Vingron

Bressin, A. S.: A Multi-Omics Analysis of Transcription Control by BRD4. Dissertation, ix, 205 pp. (2023)

Ly, L.-H.: Deciphering cellular heterogeneity by single-cell transcriptome analysis. Dissertation, xiii, 131 pp. (2022)

Kleinert, P.: Computational interpretation of disease-causing, structural, and non-coding human genetic variants. Dissertation, 118 pp. (2022)

Gajos, M.: Analysis of the determinants of Pol II pausing. Dissertation, vi, 125 pp. (2022)

Abdullaev, E.: Dynamical Aspects of the Evolution of Segmental Duplications in the Human Genome. Dissertation, xiii, 129 pp. (2022)

Gralinska, E.: Association Plots visualize cluster-specific genes from high-dimensional transcriptomics data. Dissertation, vi, 108 pp. (2022)

Barel, G.: Network Propagation with Node Core for Genotype-Phenotype Associations and Module Identification. Dissertation, xii, 161 pp. (2021)

Zehnder, T.: Computational Approaches for the Prediction of Gene Regulatory Elements and the Analysis of their Evolutionary Conservation. Dissertation, vii, 155 pp. (2021)

Heller, D.: Structural variant calling using third-generation sequencing data. Dissertation, xiii, 139 pp. (2021)

Moeinzadeh, M.: De novo and haplotype assembly of polyploid genomes. Dissertation, vii, 157 pp. (2019)

Ramisch, A.: Enhancer Prediction Based on Epigenomic Data. Dissertation, iv, 186 pp. (2019)

Huska, M. R.: Using machine learning to predict and better understand DNA methylation and genomic enhancers. Dissertation, viii, 143 pp., Freie Universität, Berlin (2018)

Helmuth, J.: Robust Normalization of Next Generation Sequencing Data. Dissertation, xii, 145 pp. (2017)

Kopp, W.: Statistical methods for motif hit enrichment in DNA sequences. Dissertation, 216 pp. (2017)

Hübner, P.: Association Plots – A Method to Detect Tissue-Specific Regulatory Patterns? Master (2024)

Kane, M.: Mathematical Modeling of High-Risk Viral Mutations. Master (2024)

Lopez Ruiz de Vargas, S.: Adding 3D chromatin structure information to enhancer- target prediction with CENTRE. Master (2024)

Raei, W. A.: Genotyping tandem repeats: Introducing Tandem Twister, a rapid and universal tool for long-read sequencing technologies. Master (2024)

Huber, W.; von Heydebreck, A.; Vingron, M.: Error models for microarray intensities, (2004)

Schindler, M.; Feregrino, C.; Aldrovandi, S.; Lo, B.-W.; Monaco, A. A.; Ringel, A. R.; Morales, A.; Zehnder, T.; Behncke, R. Y.; Glaser, J. et al.; Barclay, A.; Andrey, G.; Kragesteen, B. K.; Hägerling, R.; Haas, S.; Vingron, M.; Ulitsky, I.; Marti-Renom, M.; Hechavarria, J.; Fasel, P.; Hiller, M.; Lupiáñez, D.; Mundlos, S.; Real, F. M.: Comparative single-cell analyses reveal evolutionary repurposing of a conserved gene program in bat wing development. bioRxiv: the preprint server for biology (2024)