Publikationen von Martin Vingron
Alle Typen
Zeitschriftenartikel (210)
1.
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IsoTools: a flexible workflow for long-read transcriptome sequencing analysis. Bioinformatics, btad364 (2023)
2.
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Prediction of protein–protein interactions using sequences ofintrinsically disordered regions. Proteins: Structure, Function, and Bioinformatics, prot.26486 (2023)
3.
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13, 6470 (2022)
Integration of Hi-C with short and long-read genome sequencing reveals the structure of germline rearranged genomes. Nature Communications 4.
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Co-option of the transcription factor SALL1 in mole ovotestis formation. bioRxiv, 514220 (2022)
5.
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185 (20), e21, S. 3689 - 3704 (2022)
Repression and 3D-restructuring resolves regulatory conflicts in evolutionarily rearranged genomes. Cell 6.
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54 (7), S. 1037 - 1050 (2022)
Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements. Nature Genetics 7.
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24, S. 981 - 995 (2022)
Enhanced cortical neural stem cell identity through short SMAD and WNT inhibition in human cerebral organoids facilitates emergence of outer radial glial cells. Nature Cell Biology 8.
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434 (11), 167525 (2022)
Visualizing Cluster-specific Genes from Single-cell Transcriptomics Data Using Association Plots. Journal of Molecular Biology 9.
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23, 67 (2022)
TADA – a Machine Learning Tool for Functional Annotation based Prioritisation of Putative Pathogenic CNVs. Genome Biology 10.
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3, 100414 (2022)
Effect of imputation on gene network reconstruction from single-cell RNA-seq data. Patterns 11.
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49 (21), gkab1100, S. 12178 - 12195 (2021)
Assessing genome-wide dynamic changes in enhancer activity during early mESC differentiation by FAIRE-STARR-seq. Nucleic Acids Research (London) 12.
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40, e105862 (2021)
RIF1 and KAP1 differentially regulate the choice of inactive versus active X chromosomes. The EMBO Journal 13.
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3 (4), lqab095 (2021)
Quantifying the tissue-specific regulatory information within enhancer DNA sequences. NAR: genomics and bioinformatics 14.
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108 (9), S. 1725 - 1734 (2021)
Position effects at the FGF8 locus are associated with femoral hypoplasia. The American Journal of Human Genetics 15.
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220 (10), e202103003 (2021)
Anisotropic expansion of hepatocyte lumina enforced by apical bulkheads. The Journal of Cell Biology: JCB 16.
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22, 191 (2021)
A trans locus causes a ribosomopathy in hypertrophic hearts that affects mRNA translation in a protein length-dependent fashion. Genome Biology 17.
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49 (8), S. 4402 - 4420 (2021)
Conserved DNA sequence features underlie pervasive RNA polymerase pausing. Nucleic Acids Research (London) 18.
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36 (22-23), S. 5519 - 5521 (2020)
SVIM-asm: structural variant detection from haploid and diploid genome assemblies. Bioinformatics 19.
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Association Plots: Visualizing associations in high-dimensional correspondence analysis biplots. bioRxiv (Preprint Server) (2020)
20.
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370 (6513), S. 208 - 214 (2020)
The mole genome reveals regulatory rearrangements associated with adaptive intersexuality. Science