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Comparative study on normalization procedures for cluster analysis of gene expression datasets. (IEEE World Congress on Computational Intelligence, Hong Kong, June 01, 2008 - June 08, 2008. International Joint Conference on Neural Networks, Hong Kong), (2008), Hong Kong (2008)

Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image data. Neural Information Processing Systems (NIPS) workshop on New Problems and Methods in Computational Biology, Whistler, Canada, December 08, 2006. BioMed Central Ltd., Whistler, Canada (2007), S1-S8 pp.

Stress response in yeast-current issues in confronting models with data. 2nd Foundations of Systems Biology in Engineering Conference, FOSBE 2007, Stuutgart, September 09, 2007 - September 12, 2007. Universität Stuttgart (2007)

Joining softassign and dynamic programming for the contact map overlap problem (Lecture Notes in Computer Science, 4414). First International Conference, BIRD 2007, Berlin, March 12, 2007 - March 14, 2007. Springer Berlin / Heidelberg, Berlin; Heidelberg (2007), 479 pp pp.

Reconstruction and validation of gene regulatory networks with neural networks. The 2nd Foundations of Systems Biology in Engineering Conference, FOSBE 2007, Stuttgart, September 09, 2007 - September 12, 2007. Universität Stuttgart, Stuttgart (2007), ? pp.

Alignment Statistics for Long-Range Correlated Genomic Sequences (Lecture Notes in Computer Science, 3909/2006). 10th Annual International Conference, RECOMB 2006, Venice, Italy, April 02, 2006 - April 05, 2006. Springer, Berlin/Heidelberg (2006), 612 pp.

RA-specific expression profiles and new candidate genes. 23rd European Workshop for Rheumatology Research, Marseille, France. BioMed Central, / (2003), / pp.

Improved gene selection for classification of microarrays. 8th Pacific Symposium on Biocomputing (PSB 2003), Lihue, Hawaii, USA, January 03, 2003 - January 07, 2003. /, / (2003), / pp.

Model-based clustering with Hidden Markov Models and its application to financial times-series data. GfKI 2002 - 26th Annual Conference of the Gesellschaft für Klassifikation, Mannheim, July 22, 2002 - July 24, 2002. /, / (2003), / pp.

Model-based clustering with Hidden Markov Models and its application to financial times series data. GfKI 2002 - 26th Annual Conference of the Gesellschaft für Klassifikation, Mannheim, July 22, 2002 - July 24, 2002. Springer, Berlin [et al] (2003), 693 pp.

Gaussian mixture density estimation applied to microarray data (Lecture Notes in Computer Sciences, 2810). 5th International Symposium on Intelligent Data Analysis, IDA 2003, Berlin, Germany, August 28, 2003 - August 30, 2003. Springer, Berlin [et al] (2003), 624 pp pp.

Cifuentes Fontanals, L.; Tonello, E.; Siebert, H.: Computing trap space-based control strategies for Boolean networks using answer set programming. In: AIP Conference Proceedings 2611, Vol. 2611, 110002. International Conference of Computational Methods in Sciences and Engineering ICCMSE 2021, Heraklion, Greece, September 04, 2021 - September 07, 2021. AIP Publishing, College Park, Maryland (2022)

Knaust, M.; Seiler, E.; Reinert, K.; Steinke, T.: Co-Design for Energy Efficient and Fast Genomic Search: Interleaved Bloom Filter on FPGA. In: FPGA '22, pp. 180 - 189. FPGA '22: Proceedings of the 2022 ACM/SIGDA International Symposium on Field-Programmable Gate Arrays, Virtual Event, February 27, 2022 - March 01, 2022. Association for Computing Machinery, New York, NY (2022)

Klarner, H.; Tonello, E.; Cifuentes Fontanals, L.; Janody, F.; Chaouiya, C.; Siebert, H.: Detection of markers for discrete phenotypes. In: CSBio2021, pp. 64 - 68. CSBio2021: The 12th International Conference on Computational Systems-Biology and Bioinformatics, Virtual Event, October 14, 2021 - October 15, 2021. Association for Computing Machinery, New York, NY (2021)

Cifuentes Fontanals, L.; Tonello, E.; Siebert, H.: Control Strategy Identification via Trap Spaces in Boolean Networks. In: CMSB 2020, part of Lecture Notes in Computer Science 12314, Vol. LNBI 12314, pp. 159 - 175 (Eds. Abate, A.; Petrov, T.; Wolf, V.). 18th International Conference, CMSB 2019: Computational Methods in Systems Biology, Konstanz, September 23, 2020 - September 25, 2020. Springer Nature Switzerland AG, Cham, Switzerland (2020)

Nowicka, M.; Siebert, H.: Designing Distributed Cell Classifier Circuits Using a Genetic Algorithm. In: CMSB 2019, part of Lecture Notes in Computer Science 11773, Vol. LNBI 11773, pp. 96 - 119 (Eds. Bortolussi, L.; Sanguinetti, G.). 17th International Conference, CMSB 2019: Computational Methods in Systems Biology, Trieste, Italy, September 18, 2019 - September 20, 2019. Springer Nature Switzerland AG, Cham, Switzerland (2019)

Rohrandt, C.; Kraft, N.; Gießelmann, P.; Brändl, B.; Schuldt, B. M.; Jetzek, U.; Müller, F.-J.: Nanopore SimulatION – a raw data simulator for Nanopore Sequencing. In: 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 18399242 . 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Madrid, Spain, December 03, 2018 - December 06, 2018. (2019)

Schöpflin, R.; Andrey, G.; Heinrich, V.; Franke, M.; Ibrahim, D.; Paliou, C.; Mundlos, S.; Vingron, M.: Identification of potential regulatory elements in Capture-C interaction profiles. In: Genome Regulation in 3D. Genome Regulation in 3D, Rehovot, Israel, June 28, 2015 - June 30, 2015. Weizmann Institute, Rehovot, Israel (2015)

Schöpflin, R.; Vingron, M.: Identification of cis-regulatory elements from chromosome conformation capture data. In: 19th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2015). 19th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2015), Warsaw, Poland, April 12, 2015 - April 15, 2015. (2015)

Singer, T.; Snower, D. J.: Caring economics. In: Proceedings of the Annual Conference of the Institute for New Economic Thinking. Annual Conference. Institute for New Economic Thinking, Paris, April 08, 2015 - April 11, 2015. (2015)