Instrumentation

Sequencing Systems

Illumina

NovaSeq 6000

NovaSeq 6000

  • Production-scale system, up to 6000 gigabases and 10 billion fragments per run in 2 days
  • maximum read length 2 x 150 bases (paired end)
  • based on a sequencing by synthesis principle and patterned flow cells
  • highly flexible system by multiple flow cell types (S1-S4)
NextSeq 2000

NextSeq 2000

  • high-output system, up to 330 GB sequencing output per run in 2 days
  • Maximum read length 2 x 150 b (paired end reads)
  • Integrated data analysis (Illumina DRAGEN Bio-IT Platform)
NextSeq 500

NextSeq 500

  • very fast system for midsize-range projects, up to 120 gigabases and 400 million fragments per run in 30 hours
  • maximum read length 2 x 150 bases
  • sequencing by synthesis principle and a dual color chemistry
MiSeq

MiSeq

  • Flexible benchtop system, up to 15 GB sequencing output
  • up to 25 million fragments per run in 2.5 days
  • Maximum read length 2 x 300 b (paired end reads)

 
iSeq 100

iSeq 100

  • smallest Illumina sequencing system
  • yields up to 4mio fragments (8mio PE reads)
  • for library testing or amplicon sequencing

Pacific Biosciences (PacBio)

PacBio Sequel II

PacBio Sequel II

  • single molecule system with a read length up to 200 kb
  • sequencing up to 16 SMRT cells per run
  • many applications, e.g. de novo genome sequencing, full length transcriptome analysis or analysis of structural variations

Additional Equipment (Sequencing Pipeline)

BluePippin from Sage Science

BluePippin from Sage Science

Targeted Size Selection for Next-Gen Sequencing (90bp - 50kb)
Spri-Te from Beckman Coulter

Spri-Te from Beckman Coulter

Nucleic Acid Extractor
Biomek NX from Beckmann Coulter

Biomek NX from Beckmann Coulter

384 Channel Liquid Handling System
Nimbus from Hamilton

Nimbus from Hamilton

System for automated emPCR Emulsion Breaking, Enrichment & Primer Annealing for the Roche GS Junior System
LightCycler 480 Real-Time PCR System from Roche

LightCycler 480 Real-Time PCR System from Roche

System for NGS library Quantification

Equipment for MPIMG Users (supervised by SeqCore)

Chromium Controller from 10x Genomics

Chromium Controller from 10x Genomics

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Location: Tower 4 - Room 0,106
Fragment Analyzer from Advanced Analytical (Agilent)

Fragment Analyzer from Advanced Analytical (Agilent)

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Location: Tower 4 - Room 0,104
2100 Bioanalyzer from Agilent Technologies

2100 Bioanalyzer from Agilent Technologies

Lab-on-a-Chip nucleic acid and protein analysis with preformatted chips

Location: Tower 4 - Room 0,104
7900HT Real-Time PCR Systems from Applied Biosystems
System for 96-/384-well qPCR

Location: Tower 4 - Room 0,104
QuantStudio 7 Flex Real-Time PCR System from Applied Biosystems
Systems for 96/384-well qPCR

Location: Tower 4 - Room 1,103 more
StepOnePlus Real-Time PCR System from Applied Biosystems
System for 96-well qPCR

Location: Tower 4 - Room 1,103
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