The following publications were published exclusively under the affiliation of the Max Planck Society. For publications by the principal investigator outside of the Max Planck Society, see the links on the lower left.
Journal Article (50)
Journal Article
90 (9), pp. 2215 - 2229 (2016)
Inter-laboratory study of human in vitro toxicogenomics-based tests as alternative methods for evaluating chemical carcinogenicity: a bioinformatics perspective. Archives of Toxikology
Journal Article
15 (5), pp. 1526 - 1538 (2016)
An impaired respiratory electron chain triggers down-regulation of the energy metabolism and de-ubiquitination of solute carrier amino acid transporters. Molecular and Cellular Proteomics
Journal Article
283 (9), pp. 1669 - 1688 (2016)
Transcriptional signature induced by a metastasis-promoting c-Src mutant in a human breast cell line. The FEBS Journal
Journal Article
2016, baw052 (2016)
ToxDB: pathway-level interpretation of drug-treatment data. Database (Oxford)
Journal Article
526 (7571), pp. 68 - 74 (2015)
A global reference for human genetic variation. Nature
Journal Article
112 (31), pp. E4236 - E4245 (2015)
Simultaneous deletion of the methylcytosine oxidases Tet1 and Tet3 increases transcriptome variability in early embryogenesis. Proceedings of the National Academy of Sciences of the United States of America
Journal Article
17 (5), pp. 545 - 557 (2015)
The histone deacetylase SIRT6 controls embryonic stem cell fate via TET-mediated production of 5-hydroxymethylcytosine. Nature Cell Biology
Journal Article
31 (9), pp. 1505 - 1507 (2015)
diXa: a data infrastructure for chemical safety assessment. Bioinformatics
Journal Article
2015, 16:136 (2015)
Algorithms for differential splicing detection using exon arrays: a comparative assessment. BMC Genomics
Journal Article
16 (4), pp. 465 - 477 (2014)
Computational modelling of drug response with applications to neuroscience. Dialogues in Clinical Neuroscience Book Chapter (3)
Book Chapter
2590, pp. 237 - 272 (Eds. Peters, B. A.; Drmanac, R.). Humana Press (Springer Science+Business Media, Springer-Verlag GmbH), New York, NY (2022)
Analysis of 1276 Haplotype-Resolved Genomes Allows Characterization of Cis- and Trans-Abundant Genes. In: Haplotyping. Methods in Molecular Biology (Springer Protocols), Vol.
Book Chapter
A Systems Biology Approach for Identifying Hepatotoxicant Groups Based on Similarity in Mechanisms of Action and Chemical Structure. In: In Silico Methods for Predicting Drug Toxicity (Ed. Benfenati , E.) (2016)
Book Chapter
Quantitative Comparison of Large-Scale DNA Enrichment Sequencing Data. In: Statistical Genomics (Eds. Mathé, E.; Davis, S.) (2016)
Thesis - PhD (3)
Thesis - PhD
Machine Learning for Cancer Survival Prediction. Dissertation (2024)
Thesis - PhD
Network Propagation with Node Core for Genotype-Phenotype Associations and Module Identification. Dissertation, xii, 161 pp. (2021)
Thesis - PhD
Computational Analysis of Genome-wide Methylation Enrichment Experiments. Dissertation, xii, 125 pp. (2017)