Kaluza, P.; Ipsen, M.; Vingron, M.; Mikhailov, A. S.: Design and statistical properties of robust functional networks: A model study of biological signal transduction. Physical Review: E, Statistical, Nonlinear and Soft Matter Physics E75, 015101 (2007)

Dieterich, C.; Franz, M. W.; Vingron, M.: Developments in CORG: a gene-centric comparative genomics resource. Nucleic Acids Research 35 (Database issue), pp. D32 - D35 (2007)

Manke, T.; Demetrius, L.; Vingron, M.: An entropic characterization of protein interaction networks and cellular robustness. Interface: Journal of the Royal Society 11 (3), pp. 843 - 850 (2006)

Zemojtel, T.; Fröhlich, A.; Palmieri, M. C.; Kolanczyk, M.; Mikula, I.; Wyrwicz, L. S.; Wanker, E. E.; Mundlos, S.; Vingron, M.; Martasek, P. et al.; Durner, J.: Plant nitric oxide synthase: a never-ending story? Trends in Plant Science 11 (11), pp. 524 - 525 (2006)

Staub, E.; Mackowiak, S.; Vingron, M.: An inventory of yeast proteins that are associated with nucleoli and ribosomal components. Genome Biology: Biology for the Post-Genomic Era 7 (10), p. R98 - R98 (2006)

Dohm, J. C.; Vingron, M.; Staub, E.: Horizontal Gene Transfer in Aminoacyl-tRNA Synthetases Including Leucine-Specific Subtypes. Journal of Molecular Evolution 63 (4), pp. 437 - 447 (2006)

Yeang, C.-H.; Vingron, M.: A joint model of regulatory and metabolic networks. BMC Bioinformatics 7, p. 332 - 332 (2006)

Steinhoff, C.; Vingron, M.: Review: Normalization and Quantification of Differential Expression. Briefings in Bioinformatics 7 (2), pp. 166 - 177 (2006)

Luz, H.; Vingron, M.: Family specific rates of protein evolution. Bioinformatics 10, pp. 1166 - 1171 (2006)

Pape, U. J.; Grossmann, S.; Hammer, S.; Sperling, S.; Vingron, M.: A new statistical model to select target sequences bound by transcription factors. Genome Informatics 17 (1), pp. 134 - 140 (2006)

Roepcke, S.; Zhi, D.; Vingron, M.; Arndt, P. F.: Identification of highly specific localized sequence motifs in human ribosomal protein gene promoters. Gene 365, pp. 48 - 56 (2006)

Irlbacher, H.; Franke, J.; Manke, T.; Vingron, M.; Ehrenhofer-Murray, A. E.: Control of replication initiation and heterochromatin formation in Saccharomyces cerevisiae by a regulator of meiotic gene expression. Genes & Development 19 (15), pp. 1811 - 1822 (2005)

Zhang, J.; Vingron, M.; Hoehe, M. R.: Haplotype reconstruction for diploid populations. Human Heredity 59 (3), pp. 144 - 156 (2005)

Roepcke, S.; Grossmann, S.; Rahmann, S.; Vingron, M.: T-Reg Comparator: an analysis tool for the comparison of position weight matrices. Web Server Issue, pp. W438 - W341 (2005)

Roepcke, S.; Fiziev, P.; Seeburg, P. H.; Vingron, M.: SVC: structured visualization of evolutionary sequence conservation. Web Server Issue, pp. W271 - W273 (2005)

Belyakin, S. N.; Christophides, G. K.; Alekseyenko, A. A.; Kriventseva, E. V.; Belyaeva, E. S.; Nanayev, R. A.; Makunin, I. V.; Hild, M.; Beckmann, B.; Haas, S. A. et al.; Koch, B.; Solovyev, V.; Busold, C.; Fellenberg, K.; Boutros, M.; Vingron, M.; Sauer, F.; Hoheisel, J. D.; Paro, R.: Genomic analysis of Drosophila chromosome underreplication reveals a link between replication control and transcriptional territories. Proceedings of the National Academy of Sciences 107 (23), pp. 8269 - 8274 (2005)

Dieterich, C.; Grossmann, S.; Tanzer, A.; Röpcke, S.; Arndt, P. F.; Stadler, P. F.; Vingron, M.: Comparative promoter region analysis powered by CORG. BMC Gnomics 6, p. 24 - 24 (2005)

Krause, A.; Stoye, J.; Vingron, M.: Large Scale Hierarchical Clustering of Protein Sequences. BMC Bioinformatics 6, p. 15 - 15 (2005)

Gupta, S.; Vingron, M.; Haas, S. A.: T-STAG: resource and web-interface for tissue-specific transcripts and genes. Nucleic Acids Research 33 ((Web Server Issue)), pp. W654 - W658 (2005)

Michael, M.; Dieterich, C.; Vingron, M.: SITEBLAST-rapid and sensitive local alignment of genomic sequences employing motif anchors. Bioinformatics 21 (9), pp. 2093 - 2094 (2005)