Journal Article (90)

Journal Article
Fernandez-Cuesta, L.; Sun, R.; Menon, R.; George, J.; Lorenz, S.; Meza-Zepeda, L. A.; Peifer, M.; Plenker, D.; Heuckmann, J. M.; Leenders, F. et al.; Zander, T.; Dahmen, I.; Koker, M.; Schöttle, J.; Ullrich, R. T.; Altmüller, J.; Becker, C.; Nürnberg, P.; Seidel, H.; Böhm, D.; Göke, F.; Ansen, S.; Russell, P. A.; Wright, G. M.; Wainer, Z.; Solomon, B.; Petersen, I.; Clement, J. H.; Sänger, J.; Brustugun, O. T.; Helland, A.; Solberg, S.; Lund-Iversen, M.; Büttner, R.; Wolf, J.; Brambilla, E.; Vingron, M.; Perner, S.; Haas, S. A.; Thomas, R. K.: Identification of novel fusion genes in lung cancer using breakpoint assembly of transcriptome sequencing data. Genome Biology: Biology for the Post-Genomic Era 16, 16:7 (2015)
Journal Article
Gielisch, I.; Meierhofer, D.: Metabolome and Proteome Profiling of Complex I Deficiency Induced by Rotenone. Journal of Proteome Research 14 (12), pp. 224 - 235 (2015)
Journal Article
Davarniya, B.; Hu, H.; Kahrizi, K.; Musante, L.; Fattahi, Z.; Hosseini, M.; Maqsoud, F.; Farajollahi, R.; Wienker, T. F.; Ropers, H. H. et al.; Najmabadi, H.: The Role of a Novel TRMT1 Gene Mutation and Rare GRM1 Gene Defect in Intellectual Disability in Two Azeri Families. PLoS One 10 (8), e0129631 (2015)
Journal Article
Gu, L.; Frommel, S. C.; Oakes, C. C.; Simon, R.; Grupp, K.; Gerig, C. Y.; Bar, D.; Robinson, M. D.; Baer, C.; Weiss, M. et al.; Gu, Z.; Schapira, M.; Kuner, R.; Sultmann, H.; Provenzano, M.; Cancer, I. P. o. E. O. P.; Yaspo, M. L.; Brors, B.; Korbel, J.; Schlomm, T.; Sauter, G.; Eils, R.; Plass, C.; Santoro, R.: BAZ2A (TIP5) is involved in epigenetic alterations in prostate cancer and its overexpression predicts disease recurrence. Nature Genetics 47 (1), pp. 22 - 30 (2015)
Journal Article
Heinig, M.; Colome-Tatche, M.; Taudt, A.; Rintisch, C.; Schafer, S.; Pravenec, M.; Hubner, N.; Vingron, M.; Johannes, F.: histoneHMM: Differential analysis of histone modifications with broad genomic footprints. BMC Bioinformatics 16, 16:60 (2015)
Journal Article
Hu, H.; Liu, X.; Jin, W.; Ropers, H. H.; Wienker, T. F.: Evaluating information content of SNPs for sample-tagging in re-sequencing projects. Scientific Reports 5, 5:10247 (2015)
Journal Article
Kärst, S.; Arends, D.; Heise, S.; Trost, J.; Yaspo, M. L.; Amstislavskiy, V.; Risch, T.; Lehrach, H.; Brockmann, G. A.: Erratum to: 'The direction of cross affects obesity after puberty in male but not female offspring'. BMC Genomics 16 (1), 16:1018 (2015)
Journal Article
Mammana, A.; Chung, H.-R.: Chromatin segmentation based on a probabilistic model for read counts explains a large portion of the epigenome. Genome Biology 16, 16:151 (2015)
Journal Article
Sheinman, M.; Sharma, A.; Alvarado, J.; Koenderink, G. H.; MacKintosh, F. C.: Anomalous discontinuity at the percolation critical point of active gels. Phys Rev Lett 114 (9), 098104 (2015)
Journal Article
Vucicevic, D.; Corradin, O.; Ntini, E.; Scacheri, P. C.; Ørom, U. A.: Long ncRNA expression associates with tissue-specific enhancers. Cell Cycle 14 (2), pp. 253 - 260 (2015)

Book Chapter (2)

Book Chapter
Caffrey, B.; Marsico, A.: Computational modeling of microRNA Biogenesis. In: Mathematical Models in Biology, pp. 85 - 98 (Eds. Zazzu, V.; Ferraro, M. B.). Springer International Publishing (2015)
Book Chapter
Meijsing, S. H.: Mechanisms of Glucocorticoid-Regulated Gene Transcription. In: Glucocorticoid Signaling: From Molecules to Mice to Man (Eds. Wang, J.-C.; Harris , C.) (2015)

Conference Paper (2)

Conference Paper
Schöpflin, R.; Andrey, G.; Heinrich, V.; Franke, M.; Ibrahim, D.; Paliou, C.; Mundlos, S.; Vingron, M.: Identification of potential regulatory elements in Capture-C interaction profiles. In: Genome Regulation in 3D, Vol. 2015. Genome Regulation in 3D, Rehovot, Israel, June 28, 2015 - June 30, 2015. Weizmann Institute, Rehovot, Israel (2015)
Conference Paper
Schöpflin, R.; Vingron, M.: Identification of cis-regulatory elements from chromosome conformation capture data. In: 19th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2015). 19th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2015), Warsaw, Poland, April 12, 2015 - April 15, 2015. (2015)

Talk (2)

Hoehe, M. R.; Lehrach, H.; Church, G. M.; Huebsch, T.: Dissecting human diploidy: Results from up to 1092 genomes. GET Global Conference, Vienna (2015)
Moeinzadeh, M.; Yang, J.; Vingron, M.: Haplotype reconstruction for polyploid organisms. BREW 2015: Bioinformatics Research and Education Workshop, University of Tartu, Tartu, Estonia (2015)

Poster (2)

Hoehe, M. R.; Church, G. M.; Lehrach, H.; Suk, E.-K.; Huebsch, T.: Multiple haplotype-resolved genomes reveal population level gene and protein diplotype patterns. CSHL Meeting "The Biology of Genomes", Cold Spring Harbor (2015)
Moeinzadeh, M.; Yang, J.; Vingron, M.: Haplotype reconstruction for sweet potato (Ipomoea Batatas [L.] Lam). 19. International Conference on Research in Computational Molecular Biology (RECOMB 2015), Warsaw (2015)

Thesis (4)

Merz, C.: Investigations of physiological Ataxin-2 cleavage products and their influence on the cellular localization of FUS. Humboldt-Universität zu Berlin (2015)
Sungsoo, L.: Analysis of mutual transcriptional interference between Xist and Tsix in bistable Xist activation. Charité – Universitätsmedizin Berlin (2015)
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