Journal Article (90)

61.
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Cesana, M.; Guo, M. H.; Cacchiarelli, D.; Wahlster, L.; Barragan, J.; Doulatov, S.; Vo, L. T.; Salvatori, B.; Trapnell, C.; Clement, K. et al.; Cahan, P.; Tsanov, K. M.; Sousa, P. M.; Tazon-Vega, B.; Bolondi, A.; Giorgi, F. M.; Califano, A.; Rinn, J. L.; Meissner, A.; Hirschhorn, J. N.; Daley, G. Q.: A CLK3-HMGA2 Alternative Splicing Axis Impacts Human Hematopoietic Stem Cell Molecular Identity throughout Development. Cell Stem Cell 22 (4), e7, pp. 575 - 588 (2018)
62.
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Vögtle, F.-N.; Brändl, B.; Larson, A.; Pendziwiat, M.; Friederich, M. W.; White, S. M.; Basinger, A.; Kücükköse, C.; Muhle, H.; Jähn, J. A. et al.; Keminer, O.; Helbig, K. L.; Delto, C. F.; Myketin, L.; Mossmann, D.; Burger, N.; Miyake, N.; Burnett, A.; van Baalen, A.; Lovell, M. A.; Matsumoto, N.; Walsh, M.; Yu, H.-C.; Deepali N. Shinde, D. N.; Stephani, U.; Van Hove, J. L. K.; Müller, F.-J.; Helbig, I.: Mutations in PMPCB Encoding the Catalytic Subunit of the Mitochondrial Presequence Protease Cause Neurodegeneration in Early Childhood. American Journal of Human Genetics 102 (4), pp. 557 - 573 (2018)
63.
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Ziller, M. J.; Ortega, J. A.; Quinlan, K. A.; Santos, D. P.; Gu, H.; Martin , E. J.; Galonska, C.; Pop, R.; Maidl, S.; Pardo, A. D. et al.; Huang , M.; Meltzer, H. Y.; Gnirke , A.; Heckman, C. J.; Meissner, A.; Kiskinis, E.: Dissecting the Functional Consequences of De Novo DNA Methylation Dynamics in Human Motor Neuron Differentiation and Physiology. Cell Stem Cell 22, pp. 1 - 16 (2018)
64.
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Charlton, J.; Downing, T. L.; Smith, Z. D.; Gu, H.; Clement, K.; Pop, R.; Akopian, V.; Klages, S.; Santos, D. P.; Tsankov, A. M. et al.; Timmermann, B.; Ziller, M. J.; Kiskinis, E.; Gnirke, A.; Meissner, A.: Global delay in nascent strand DNA methylation. Nature Structural and Molecular Biology 25 (4), pp. 327 - 332 (2018)
65.
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Charlton, J.; Downing, T. L.; Smith, Z. D.; Gu, H.; Clement, K.; Pop, R.; Akopian, V.; Klages, S.; Santos, D. P.; Tsankov, A. M. et al.; Timmermann, B.; Ziller, M. J.; Kiskinis, E.; Gnirke, A.; Meissner, A.: Author Correction: Global delay in nascent strand DNA methylation. Nature Structural and Molecular Biology 25 (4), p. 355 (2018)
66.
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Orgeur, M.; Martens, M.; Leonte, G.; Nassari, S.; Bonnin, M.-A.; Börno, S. T.; Timmermann, B.; Hecht, J.; Duprez, D.; Stricker, S.: Genome-wide strategies identify downstream target genes of connective tissue-associated transcription factors. Development 145 (7), dev161208 (2018)
67.
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Smith, T. C. A.; Arndt, P. F.; Eyre-Walker, A.: Large scale variation in the rate of germ-line de novo mutation, base composition, divergence and diversity in humans. PLoS Genetics 14 (3), e1007254 (2018)
68.
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George, J.; Walter, V.; Peifer, M.; Alexandrov, L. B.; Seidel, D.; Leenders, F.; Maas, L.; Müller, C.; Dahmen, I.; Delhomme, T. M. et al.; Ardin, M.; Leblay, N.; Byrnes, G.; Sun, R.; De Reynies, A.; McLeer-Florin, A.; Bosco, G.; Malchers, F.; Menon, R.; Altmüller, J.; Becker, C.; Nürnberg, P.; Achter, V.; Lang, U.; Schneider, P. M.; Bogus, M.; Soloway, M. G.; Wilkerson, M. D.; Cun, Y.; McKay, J. D.; Moro-Sibilot, D.; Brambilla, C. G.; Lantuejoul, S.; Lemaitre, N.; Soltermann, A.; Weder, W.; Tischler, V.; Brustugun, O. T.; Lund-Iversen, M.; Helland, A.; Solberg, S.; Ansen, S.; Wright, G.; Solomon, B.; Roz, L.; Pastorino, U.; Petersen, I.; Clement, J. H.; Sanger, J.; Wolf, J.; Vingron, M.; Zander, T.; Perner, S.; Travis, W. D.; Haas, S. A.; Olivier, M.; Foll, M.; Buttner, R.; Hayes, D. N.; Brambilla, E.; Fernandez-Cuesta, L.; Thomas, R. K.: Integrative genomic profiling of large-cell neuroendocrine carcinomas reveals distinct subtypes of high-grade neuroendocrine lung tumors. Nature Communications 9 (1), 1048 (2018)
69.
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Smol, T.; Petit, F.; Piton, A.; Keren, B.; Sanlaville, D.; Afenjar, A.; Baker, S.; Bedoukian, E. C.; Bhoj, E. J.; Bonneau, D. et al.; Boudry-Labis, E.; Bouquillon, S.; Boute-Benejean, O.; Caumes, R.; Chatron, N.; Colson, C.; Coubes, C.; Coutton, C.; Devillard, F.; Dieux-Coeslier, A.; Doco-Fenzy, M.; Ewans, L. J.; Faivre, L.; Fassi, E.; Field, M.; Fournier, C.; Francannet, C.; Genevieve, D.; Giurgea, I.; Goldenberg, A.; Green, A. K.; Guerrot, A. M.; Heron, D.; Isidor, B.; Keena, B. A.; Krock, B. L.; Kuentz, P.; Lapi, E.; Le Meur, N.; Lesca, G.; Li, D.; Marey, I.; Mignot, C.; Nava, C.; Nesbitt, A.; Nicolas, G.; Roche-Lestienne, C.; Roscioli, T.; Satre, V.; Santani, A.; Stefanova, M.; Steinwall Larsen, S.; Saugier-Veber, P.; Picker-Minh, S.; Thuillier, C.; Verloes, A.; Vieville, G.; Wenzel, M.; Willems, M.; Whalen, S.; Zarate, Y. A.; Ziegler, A.; Manouvrier-Hanu, S.; Kalscheuer, V. M.; Gerard, B.; Ghoumid, J.: MED13L-related intellectual disability: involvement of missense variants and delineation of the phenotype. Neurogenetics, pp. 1 - 11 (2018)
70.
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Bulut-Karslioglu, A.; Macrae, T. A.; Oses-Prieto, J. A.; Covarrubias, S.; Percharde, M.; Ku, G.; Diaz, A.; McManus, M. T.; Burlingame, A. L.; Ramalho-Santos, M.: The Transcriptionally Permissive Chromatin State of Embryonic Stem Cells Is Acutely Tuned to Translational Output. Cell Stem Cell 22 (3), e8, pp. 369 - 383 (2018)
71.
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Piard, J.; Lespinasse, J.; Vlckova, M.; Mensah, M.; Lurian, S.; Simandlova, M.; Malikova, M.; Bartsch, O.; Rossi, M.; Lenoir, M. et al.; Nugues, F.; Mundlos, S.; Kornak, U.; Stanier, P.; Sousa, S.; Van Maldergem, L.: Cutis Laxa and Excessive Bone Growth due to de novo mutations in PTDSS1. American Journal of Medical Genetics Part A 176 (3), pp. 668 - 675 (2018)
72.
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Ho, B.; Greenlaw, K.; Al Tuwaijri, A.; Moussette, S.; Martinez, F.; Giorgio, E.; Brusco, A.; Ferrero, G. B.; Linhares, N. D.; Valadares, E. R. et al.; Svartman, M.; Kalscheuer, V. M.; Rodriguez Criado, G.; Laprise, C.; Greenwood, C. M. T.; Naumova, A. K.: X chromosome dosage and presence of SRY shape sex-specific differences in DNA methylation at an autosomal region in human cells. Biology of Sex Differences 9 (1), 9:10 (2018)
73.
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Li, Y.; Lee, M.; Kim, N.; Wu, G.; Deng, D.; Kim, J. M.; Liu, X.; Heo, W. D.; Zi, Z.: Spatiotemporal Control of TGF-β Signaling with Light. ACS Synthetic Biology 7 (2), pp. 443 - 451 (2018)
74.
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Piard, J.; Hu, J. H.; Campeau, P. M.; Rzonca, S.; Van Esch, H.; Vincent, E.; Han, M.; Rossignol, E.; Castaneda, J.; Chelly, J. et al.; Skinner, C.; Kalscheuer, V. M.; Wang, R.; Lemyre, E.; Kosinska, J.; Stawinski, P.; Bal, J.; Hoffman, D. A.; Schwartz, C. E.; Van Maldergem, L.; Wang, T.; Worley, P. F.: FRMPD4 mutations cause X-linked intellectual disability and disrupt dendritic spine morphogenesis. Human Molecular Genetics 27 (4), pp. 589 - 600 (2018)
75.
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Galonska, C.; Charlton, J.; Mattei, A. L.; Donaghey, J.; Clement, K.; Gu, H.; Mohammad, A. W.; Stamenova, E. K.; Cacchiarelli, D.; Klages, S. et al.; Timmermann, B.; Cantz, T.; Schöler, H. R.; Gnirke, A.; Ziller, M. J.; Meissner, A.: Genome-wide tracking of dCas9-methyltransferase footprints. Nature Communications 9, 9:597 (2018)
76.
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Baek, J. Y.; Geissner, A.; Rathwell, D. C. K.; Meierhofer, D.; Pereira, C. L.; Seeberger , P.: A modular synthetic route to size-defined immunogenic Haemophilus influenzae b antigens is key to the identification of an octasaccharide lead vaccine candidate. Chemical Science 9 (5), pp. 1279 - 1288 (2018)
77.
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Janssens, S.; Schotsaert, M.; Karnik, R.; Balasubramaniam, V.; Dejosez, M.; Meissner, A.; García-Sastre, A.; Zwaka, T. P.: Zika Virus Alters DNA Methylation of Neural Genes in an Organoid Model of the Developing Human Brain. mSystems 3 (1), e00219-17 (2018)
78.
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Donaghey, J.; Thakurela, S.; Charlton, J.; Chen, J. S.; Smith, Z. D.; Gu, H.; Pop, R.; Clement, K.; Stamenova, E. K.; Karnik, R. et al.; Kelley, D. R.; Gifford, C. A.; Cacchiarelli, D.; Rinn, J. L.; Gnirke, A.; Ziller, M. J.; Meissner, A.: Genetic determinants and epigenetic effects of pioneer-factor occupancy. Nature Genetics 50 (2), pp. 250 - 258 (2018)
79.
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Palmer, E. E.; Stuhlmann, T.; Weinert, S.; Haan, E.; van Esch, H.; Holvoet, M.; Boyle, J.; Leffler, M.; Raynaud, M.; Moraine, C. et al.; van Bokhoven, H.; Kleefstra, T.; Kahrizi, K.; Najmabadi, H.; Ropers, H.-H.; Delgado, M. R.; Sirsi, D.; Golla, S.; Sommer, A.; Pietryga, M. P.; Chung, W. K.; Wynn, J.; Rohena, L.; Bernardo, E.; Hamlin, D.; Faux, B. M.; Grange, D. K.; Manwaring, L.; Tolmie, J.; Joss, S.; Study, D. D. D.; Cobben, J. M.; Duijkers, F. A. M.; Goehringer, M.; Challman, T. D.; Hennig, F.; Fischer, U.; Grimme, A.; Suckow, V.; Musante, L.; Nicholl, J.; Shaw, M.; Lodh, S. P.; Niu, Z.; Rosenfeld, A.; Stankiewicz, P.; Jentsch, T. H.; Gecz, J.; Field, M.; Kalscheuer, V. M.: De novo and inherited mutations in the X-linked gene CLCN4 are associated with syndromic intellectual disability and behavior and seizure disorders in males and females. Molecular Psychiatry 23 (2), pp. 222 - 230 (2018)
80.
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Orgeur, M.; Martens, M.; Börno, S. T.; Timmermann, B.; Duprez, D.; Stricker, S.: A dual transcript-discovery approach to improve the delimitation of gene features from RNA-seq data in the chicken model. Biology Open 7 (1), bio.028498 (2018)
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