Journal Article (71)

Journal Article
Yu , V. W. C.; Yusuf , R. Z.; Oki , T.; Wu, J.; Saez, B.; Wang, X.; Cook , C.; Baryawno , N.; Ziller , M. J.; Lee , E. et al.; Gu, H.; Meissner, A.; Lin, C. P.; Kharchenko, P. V.; Scadden , D. T.: Correction: Epigenetic Memory Underlies Cell-Autonomous Heterogeneous Behavior of Hematopoietic Stem Cells. Cell 168 (5), pp. 944 - 945 (2017)
Journal Article
Seidel, G.; Meierhofer, D.; Şen, N.-E.; Guenther, A.; Krobitsch, S.; Auburger, G.: Quantitative Global Proteomics of Yeast PBP1 Deletion Mutants and Their Stress Responses Identifies Glucose Metabolism, Mitochondrial, and Stress Granule Changes. Journal of Proteome Research 16 (2), pp. 504 - 515 (2017)
Journal Article
Andrey, G.; Schöpflin, R.; Jerković, I.; Heinrich, V.; Ibrahim, D.; Paliou, C.; Hochradel, M.; Timmermann, B.; Haas, S.; Vingron, M. et al.; Mundlos, S.: Characterization of hundreds of regulatory landscapes in developing limbs reveals two regimes of chromatin folding. Genome Research 27 (2), pp. 223 - 233 (2017)
Journal Article
Hu, H.; Hübner, C.; Lukacs, Z.; Musante, L.; Gill, E.; Wienker, T. F.; Ropers, H. H.; Knierim, E.; Schuelke, M.: Klüver-Bucy syndrome associated with a recessive variant in HGSNAT in two siblings with Mucopolysaccharidosis type IIIC (Sanfilippo C). European journal of human genetics 25 (2), pp. 253 - 256 (2017)
Journal Article
Fuchs, A.; Torroba, M.; Kinkley, S.: PHF13: A new player involved in RNA polymerase II transcriptional regulation and co-transcriptional splicing. Transcription 8 (2), pp. 106 - 112 (2017)
Journal Article
Jerković, I.; Ibrahim, D.; Andrey, G.; Haas, S.; Hansen, P.; Janetzki, C.; Gonzalez Navarrete, I.; Robinson, P. N.; Hecht, J.; Mundlos, S.: Genome-Wide Binding of Posterior HOXA/D Transcription Factors Reveals Subgrouping and Association with CTCF. PLoS Genetics 13 (1), e1006567 (2017)
Journal Article
Hussong, M.; Kaehler, C.; Kerick, M.; Grimm, C.; Franz, A.; Timmermann, B.; Welzel, F.; Isensee, J.; Hucho, T.; Krobitsch, S. et al.; Schweiger, M. R.: The bromodomain protein BRD4 regulates splicing during heat shock. Nucleic Acids Research (London) 45 (1), pp. 382 - 394 (2017)
Journal Article
Birth, P.; Schöne, S.; Stelzl, U.; Meijsing, S. H.: Identification and characterization of BATF3 as a context-specific coactivator of the glucocorticoid receptor. PLoS One 12 (7), e0181219 (2017)
Journal Article
Ogilvie, L. A.; Kovachev, A.; Wierling, C.; Lange, B. M. H.; Lehrach, H.: Models of Models: A Translational Route for Cancer Treatment and Drug Development. Frontiers in Oncology 7, 7:219 (2017)
Journal Article
Schütte, M.; Ogilvie, L. A.; Rieke, D. T.; Lange, B. M. H.; Yaspo, M. L.; Lehrach, H.: Cancer Precision Medicine: Why More Is More and DNA Is Not Enough. Public Health Genomics 20 (2), pp. 70 - 80 (2017)
Journal Article
Schütte, M.; Risch, T.; Abdavi Azar, N.; Boehnke, K.; Schumacher, D.; Keil, M.; Yildiriman, R.; Jandrasits, C.; Borodina, T.; Amstislavskiy, V. et al.; Worth, C. L.; Schweiger, C.; Liebs, S.; Lange, M.; Warnatz, H. J.; Butcher, L. M.; Barrett, J. E.; Sultan, M.; Wierling, C.; Golob-Schwarzl, N.; Lax, S.; Uranitsch, S.; Becker, M.; Welte, Y.; Regan, J. L.; Silvestrov, M.; Kehler, I.; Fusi, A.; Kessler, T.; Herwig, R.; Landegren, U.; Wienke, D.; Nilsson, M.; Velasco, J. A.; Garin-Chesa, P.; Reinhard, C.; Beck, S.; Schafer, R.; Regenbrecht, C. R.; Henderson, D.; Lange, B.; Haybaeck, J.; Keilholz, U.; Hoffmann, J.; Lehrach, H.; Yaspo, M. L.: Molecular dissection of colorectal cancer in pre-clinical models identifies biomarkers predicting sensitivity to EGFR inhibitors. Nature Communications 8, 8:14262 (2017)

Book Chapter (3)

Book Chapter
Mayer, A.; Churchman, L. S.: A detailed protocol for subcellular RNA sequencing (subRNA-seq). In: Current Protocols in Molecular Biology, Vol. Suppl. 120, pp. 4.29.1 - 4.29.18 (Ed. Ausubel, F. M.). John Wiley & Sons, Inc., Hoboken, NJ (2017)
Book Chapter
Suk, E. K.; Schulz , S.; Mentrup, B.; Huebsch, T.; Duitama, J.; Hoehe, M. R.: A Fosmid Pool-Based Next Generation Sequencing Approach to Haplotype-Resolve Whole Genomes. In: Haplotyping: Methods and Protocols (Eds. Tiemann-Boege, I.; Betancourt, A.) (2017)
Book Chapter
Yang, X.; Marsico, A.: In silico promoter recognition from deepCAGE data. In: Enhancer RNAs: Methods and Protocols (Ed. Ørom, U. A.) (2017)

Thesis - PhD (5)

Thesis - PhD
Heinrich, V.: Aspects of Quality Control for Next Generation Sequencing Data in Medical Genetics. Dissertation, vi, 137, XXVII pp pp., Freie Universität, Berlin (2017)
Thesis - PhD
Helmuth, J.: Robust Normalization of Next Generation Sequencing Data. Dissertation, xii, 145 pp., Freie Universität, Berlin (2017)
Thesis - PhD
Huska, M.: Using machine learning to predict and better understand DNA methylation and genomic enhancers. Dissertation, Freie Universität, Berlin (2017)
Thesis - PhD
Kopp, W.: Statistical methods for motif hit enrichment in DNA sequences. Dissertation, 216 pp., Freie Universität, Berlin (2017)
Thesis - PhD
Lienhard, M.: Computational Analysis of Genome-wide Methylation Enrichment Experiments. Dissertation, xii, 125 pp., Freie Universität, Berlin (2017)

Thesis - Bachelor (4)

Thesis - Bachelor
Meier zu Ummeln, S.: Comparison of Co-occurency of Transcription Factors in cell type specific DNase hypersensitive sites in diseased and healthy liver tissue. Bachelor, Freie Universität, Berlin (2017)
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