Journal Article (81)

21.
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Kinkley, S.; Helmuth, J.; Polansky, J. K.; Dunkel, I.; Gasparoni, G.; Fröhler, S.; Chen, W.; Walter, J.; Hamann, A.; Chung, H.-R.: reChIP-seq reveals widespread bivalency of H3K4me3 and H3K27me3 in CD4+ memory T-Cells. Nature Communications 7, 7:12514 (2016)
22.
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Fenouil, R.; Descostes, N.; Spinelli, .; Koch, F.; Maqbool, M. A.; Benoukraf, T.; Cauchy, P.; Innocenti , C.; Ferrier , P.; Andrau, J.-C.: Pasha: a versatile R package for piling chromatin HTS data. Bioinformatics 32 (16), pp. 2528 - 2530 (2016)
23.
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Batalha, V.; Ferreira, D. G.; Coelho, J. E.; Valadas, J. S.; Gomes, R.; Temido-Ferreira, M.; Shmidt, T.; Baqi, Y.; Buée, L.; Müller, C. E. et al.; Hamdane, M.; Outeiro, T. F.; Bader, M.; Meijsing, S.; Sadri-Vakili, G.; Blum, D.; Lopes, L. V.: The caffeine-binding adenosine A2A receptor induces age-like HPA-axis dysfunction by targeting glucocorticoid receptor function. Scientific Reports 6, 31493 (2016)
24.
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Sheinman, M.; Ramisch, A.; Massip, F.; Arndt, P. F.: Evolutionary dynamics of selfish DNA explains the abundance distribution of genomic subsequences. Scientific Reports 6, 30851 (2016)
25.
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Apelt, L.; Knockenhauer, K. E.; Leksa, N. C.; Benlasfer, N.; Schwartz, T. U.; Stelzl, U.: Systematic Protein-Protein Interaction Analysis Reveals Intersubcomplex Contacts in the Nuclear Pore Complex. Molecular and Cellular Proteomics 15 (8), pp. 2594 - 2606 (2016)
26.
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Budach, S.; Heinig, M.; Marsico, A.: Principles of microRNA Regulation Revealed Through Modeling microRNA Expression. Genetics 203 (4), pp. 1629 - 1640 (2016)
27.
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Du Bois, I.; Marsico, A.; Bertrams, W.; Schweiger, M. R.; Caffrey, B.; Sittka-Stark, A.; Eberhardt, M.; Vera, J.; Vingron, M.; Schmeck, B. T.: Genome-wide Chromatin Profiling of Legionella pneumophila-Infected Human Macrophages Reveals Activation of the Probacterial Host Factor TNFAIP2. The Journal of Infectious Diseases 214 (3), pp. 454 - 463 (2016)
28.
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Flöttmann, R.; Sowinska-Seidler, A.; Lavie, J.; Chateil, J. F.; Lacombe, D.; Mundlos, S.; Horn, D.; Spielmann, M.: Duplication of PTHLH causes osteochondroplasia with a combined brachydactyly type E/A1 phenotype with disturbed bone maturation and rhizomelia. European journal of human genetics 24 (8), pp. 1132 - 1136 (2016)
29.
Journal Article
Knaus, A.; Awaya, T.; Helbig, I.; Afawi, Z.; Pendziwiat, M.; Abu-Rachma, J.; Thompson, M. D.; Cole, D. E.; Skinner, S.; Annese, F. et al.; Canham, N.; Schweiger, M. R.; Robinson, P. N.; Mundlos, S.; Kinoshita, T.; Munnich, A.; Murakami, Y.; Horn, D.; Krawitz, P. M.: Rare Noncoding Mutations Extend the Mutational Spectrum in the PGAP3 Subtype of Hyperphosphatasia with Mental Retardation Syndrome. Human Mutations 37 (8), pp. 737 - 744 (2016)
30.
Journal Article
Telorac, J.; Prykhozhij, S.; Schöne, S.; Meierhofer, D.; Sauer, S.; Thomas-Chollier, M.; Meijsing, S. H.: Identification and characterization of DNA sequences that prevent glucocorticoid receptor binding to nearby response elements. Nucleic Acids Research (London) 44 (13), pp. 6142 - 6156 (2016)
31.
Journal Article
Castelo-Branco, P.; Leão, R.; Lipman, T.; Campbell, B.; Lee, D.; Price, A.; Zhang, C.; Heidari, A.; Stephens, D.; Boerno, S. T. et al.; Coelho, H.; Gomes, A.; Domingos, C.; Apolonio, J. D.; Schäfer, G.; Bristow, R. G.; Schweiger, M. R.; Hamilton, R.; Zlotta, A.; Figueiredo, A.; Helmut, K.; Sültmann, H.; Tabori, U.: A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: A retrospective cohort study. Oncotarget 36 (7), pp. 57726 - 57736 (2016)
32.
Journal Article
Libertini, E.; Heath, S. C.; Hamoudi, R. A.; Gut, M.; Ziller, M. J.; Herrero, J.; Czyz, A.; Ruotti, V.; Stunnenberg, H. G.; Frontini, M. et al.; Ouwehand, W. H.; Meissner, A.: Saturation analysis for whole-genome bisulfite sequencing data. Nature Biotechnology 34 (7), pp. 691 - 693 (2016)
33.
Journal Article
Schmitz, S. U.; Grote, P.; Herrmann, B. G.: Mechanisms of long noncoding RNA function in development and disease. Cellular and Molecular Life Sciences 73 (13), pp. 2491 - 2509 (2016)
34.
Journal Article
Sudheer, S.; Liu, J.; Marks, M.; Koch, F.; Anurin, A.; Scholze, M.; Senft, A. D.; Wittler, L.; Macura, K.; Grote, P. et al.; Herrmann, B. G.: Different Concentrations of FGF Ligands, FGF2 or FGF8 Determine Distinct States of WNT-Induced Presomitic Mesoderm. Stem Cells 34 (7), pp. 1790 - 800 (2016)
35.
Journal Article
Vucicevic, D.; Gehre, M.; Dhamija, S.; Friis-Hansen, L.; Meierhofer, D.; Sauer, S.; Ørom, U. A.: The long non-coding RNA PARROT is an upstream regulator of c-Myc and affects proliferation and translation. Oncotarget 7 (23), pp. 33934 - 33947 (2016)
36.
Journal Article
Libertini, E.; Heath, S. C.; Hamoudi, R. A.; Gut, M.; Ziller, M. J.; Czyz, A.; Ruotti, V.; Stunnenberg, H. G.; Frontini, M.; Ouwehand, W. H. et al.; Meissner, A.: Information recovery from low coverage whole-genome bisulfite sequencing. Nature Communications 2016, 7:11306 (2016)
37.
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Poznik, G. D.; Xue, Y.; Mendez, F. L.; Willems, T. F.; Massaia, A.; Wilson Sayres, M. A.; The 1000 Genomes Projekt, C.; Lehrach, H.; Sudbrak, R.; Albrecht, M. W. et al.; Amstislavskiy, V.; Borodina, T. A.; Lienhard, M.; Mertes, F.; Sultan, M.; Timmermann, B.; Yaspo, M.-L.: Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences. Nature Genetics 48 (6), pp. 593 - 599 (2016)
38.
Journal Article
Chung, H.-R.; Xu, C.; Fuchs, A.; Mund, A.; Lange, M.; Staege, H.; Schubert, T.; Bian, C.; Dunkel, I.; Eberharter, A. et al.; Regnard, C.; Klinker, H.; Meierhofer, D.; Cozzuto, L.; Winterpracht, A.; Di Croce, L.; Min, J.; Will, H.; Kinkley, S.: PHF13 is a molecular reader and transcriptional co-regulator of H3K4me2/3. eLife 5, 5:e10607 (2016)
39.
Journal Article
McGinn, S.; Bauer, D.; Bretfort, T.; Mertes, F.; Lehrach, H.; Sauer, S.: New technologies for DNA analysis - a review of the READNA Project. New biotechnology 33 (3), pp. 311 - 330 (2016)
40.
Journal Article
Oh, S.; Flynn, R. A.; Floor, S. N.; Purzner, J.; Martin, L.; Do, B. T.; Schubert, S.; Vaka, D.; Morrissy, S.; Li, Y. et al.; Kool, M.; Hovestadt, V.; Jones, D. T.; Northcott, P. A.; Risch, T.; Warnatz, H. J.; Yaspo, M. L.; Adams, C. M.; Leib, R. D.; Breese, M.; Marra, M. A.; Malkin, D.; Lichter, P.; Doudna, J. A.; Pfister, S. M.; Taylor, M. D.; Chang, H. Y.; Cho, Y. J.: Medulloblastoma-associated DDX3 variant selectively alters the translational response to stress. Oncotarget 7 (19), pp. 28169 - 28182 (2016)
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