Publications of Martin Vingron
All genres
Thesis - PhD (25)
2024
Thesis - PhD
Machine Learning for Cancer Survival Prediction. Dissertation (2024)
Thesis - PhD
Copy number variation characterization using nanopore sequencing. Dissertation (2024)
Thesis - PhD
Exploring feature identification and machine learning in predicting protein-protein interactions of disordered proteins. Dissertation (2024)
2023
Thesis - PhD
Dissecting regional heterogeneity and modeling transcriptional cascades in brain organoids. Dissertation, vii, 129 pp. (2023)
Thesis - PhD
A Multi-Omics Analysis of Transcription Control by BRD4. Dissertation, ix, 205 pp. (2023)
2022
Thesis - PhD
Deciphering cellular heterogeneity by single-cell transcriptome analysis. Dissertation, xiii, 131 pp. (2022)
Thesis - PhD
Computational interpretation of disease-causing, structural, and non-coding human genetic variants. Dissertation, 118 pp. (2022)
Thesis - PhD
Analysis of the determinants of Pol II pausing. Dissertation, vi, 125 pp. (2022)
Thesis - PhD
Dynamical Aspects of the Evolution of Segmental Duplications in the Human Genome. Dissertation, xiii, 129 pp. (2022)
Thesis - PhD
Association Plots visualize cluster-specific genes from high-dimensional transcriptomics data. Dissertation, vi, 108 pp. (2022)
2021
Thesis - PhD
Network Propagation with Node Core for Genotype-Phenotype Associations and Module Identification. Dissertation, xii, 161 pp. (2021)
Thesis - PhD
Computational Approaches for the Prediction of Gene Regulatory Elements and the Analysis of their Evolutionary Conservation. Dissertation, vii, 155 pp. (2021)
Thesis - PhD
Structural variant calling using third-generation sequencing data. Dissertation, xiii, 139 pp. (2021)
2019
Thesis - PhD
De novo and haplotype assembly of polyploid genomes. Dissertation, vii, 157 pp. (2019)
Thesis - PhD
Enhancer Prediction Based on Epigenomic Data. Dissertation, iv, 186 pp. (2019)
2018
Thesis - PhD
Using machine learning to predict and better understand DNA methylation and genomic enhancers. Dissertation, viii, 143 pp., Freie Universität, Berlin (2018)
2017
Thesis - PhD
Robust Normalization of Next Generation Sequencing Data. Dissertation, xii, 145 pp. (2017)
Thesis - PhD
Statistical methods for motif hit enrichment in DNA sequences. Dissertation, 216 pp. (2017)
2012
Thesis - PhD
Analysis of long-distance gene regulatory elements. Dissertation (2012)
2011
Thesis - PhD
Influence of histone modifications on mRNA abundance and structure. Dissertation (2011)