Suchergebnisse

Cusack, B. P.; Arndt, P. F.; Duret, L.; Roest Crollius, H.: Preventing dangerous nonsense: selection for robustness to transcriptional error in human genes. PLoS Genet 7 (10), S. e1002276 (2011)

Schutze, T.; Wilhelm, B.; Greiner, N.; Braun, H.; Peter, F.; Morl, M.; Erdmann, V. A.; Lehrach, H.; Konthur, Z.; Menger, M. et al.; Arndt, P. F.; Glokler, J.: Probing the SELEX Process with Next-Generation Sequencing. PLoS ONE 6 (12), S. e29604 - e29604 (2011)

Zemojtel, T.; Kielbasa, S. M.; Arndt, P. F.; Behrens, S.; Bourque, G.; Vingron, M.: CpG deamination creates transcription factor-binding sites with high efficiency. Genome Biol Evol 3, S. 1304 - 11 (2011)

Schütze, T.; Arndt, P. F.; Menger, M.; Wochner, A.; Vingron, M.; Erdmann, V. A.; Lehrach, H.; Kaps, C.; Glökler, J.: A calibrated diversity assay for nucleic acid libraries using DiStRO-a Diversity Standard of Random Oligonucleotides. Nucleic Acids Research 38 (4), S. e23 - e23 (2010)

Polak, P.; Querfurth, R.; Arndt, P. F.: The evolution of transcription-associated biases of mutations across vertebrates. BMC Evolutionary Biology 10, S. 10:187 - 10:187 (2010)

Zemojtel, T.; Kielbasa, S. M.; Arndt, P. F.; Chung, H.-R.; Vingron, M.: Methylation and deamination of CpGs generate p53-binding sites on a genomic scale. Trends in Genetics 25 (2), S. 63 - 66 (2009)

Squartini, F.; Arndt, P. F.: Quantifying the stationarity and time reversibility of the nucleotide substitution process. Molecular Biology and Evolution 25 (12), S. 2525 - 2535 (2008)

Duret, L.; Arndt, P. F.: The Impact of Recombination on Nucleotide Substitutions in the Human Genome e1000071 (2008). PLoS Genetics 4 (5), S. e1000071 - e1000071 (2008)

Polak, P.; Arndt, P. F.: Transcription induces strand-specific mutations at the 5? end of human genes. Genome Research 18 (8), S. 1216 - 1223 (2008)

Arndt, P. F.; Vingron, M.: The Otto Warburg International Summer School and Workshop on Networks and Regulation. BMC Bioinformatics 8 (Suppl) (6), S. S1 - S1 (2007)

de la Chaux, N.; Messer, P. W.; Arndt, P.: DNA indels in coding regions reveal selective constraints on protein evolution in the human lineage. BMC Evolutionary Biology 7, S. 191 - 102 (2007)

Messer, P. W.; Bundschuh, R.; Vingron, M.; Arndt, P. F.: Effects of Long-Range Correlations in DNA on Sequence Alignment Score Statistics. Journal of Computational Biology: A Journal of Computational Molecular Cell Biology 14 (5), S. 655 - 668 (2007)

Messer, P. W.; Arndt, P. F.: The Majority of Recent Short DNA Insertions in the Human Genome Are Tandem Duplications. Molecular Biology and Evolution: MBE 24 (5), S. 1190 - 1197 (2007)

Messer, P. W.; Arndt, P. F.: CorGen-measuring and generating long-range correlations for DNA sequence analysis. Nucleic Acids Research 34, S. W692 - W695 (2006)

Lipatov1, M.; Arndt, P. F.; Hwa, T.; Petrov, D. A.: A novel method distinguishes between mutation rates and fixation biases in patterns of single-nucleotide substitution. Journal of Molecular Evolution: the Journal of the International Society of Molecular Evolution 62 (2), S. 168 - 175 (2006)

Roepcke, S.; Zhi, D.; Vingron, M.; Arndt, P. F.: Identification of highly specific localized sequence motifs in human ribosomal protein gene promoters. Gene 365, S. 48 - 56 (2006)

Messer, P.; Lässig, M.; Arndt, P. F.: Universality of long-range correlations in expansion-randomization systems. Journal of Statistical Mechanics: Theory and Experiment (10), S. P10004 - P10004 (2005)

Arndt, P. F.; Hwa, T.; Petrov, D. A.: Substantial Regional Variation in Substitution Rates in the Human Genome: Importance of GC Content, Gene Density, and Telomere-Specific Effects. Journal of Molecular Evolution: the Journal of the International Society of Molecular Evolution 60(6) (6), S. 748 - 763 (2005)

Messer, P. W.; Arndt, P. F.; Lässig, M.: Solvable Sequence Evolution Models and Genomic Correlations. Physical Review Letters 94, S. 138103-1 - 138103-4 (2005)

Webster, M. T.; Smith, N. G. C.; Hultin-Rosenberg, L.; Arndt, P. F.; Ellegren, H.: Male-Driven Biased Gene Conversion Governs the Evolution of Base Composition in Human Alu Repeats. Molecular Biology and Evolution 22 (6), S. 1468 - 1474 (2005)