Publications of Peter F. Arndt
All genres
Journal Article (46)
21.
Journal Article
6 (12), e29604 (2011)
Probing the SELEX Process with Next-Generation Sequencing. PLoS ONE 22.
Journal Article
3, pp. 236 - 45 (2011)
Substitution patterns are under different influences in primates and rodents. Genome Biol Evol 23.
Journal Article
7 (10), p. e1002276 (2011)
Preventing dangerous nonsense: selection for robustness to transcriptional error in human genes. PLoS Genet 24.
Journal Article
6 (12), p. e29604 - e29604 (2011)
Probing the SELEX Process with Next-Generation Sequencing. PLoS ONE 25.
Journal Article
3, pp. 1304 - 11 (2011)
CpG deamination creates transcription factor-binding sites with high efficiency. Genome Biol Evol 26.
Journal Article
38 (4), p. e23 - e23 (2010)
A calibrated diversity assay for nucleic acid libraries using DiStRO-a Diversity Standard of Random Oligonucleotides. Nucleic Acids Research 27.
Journal Article
10, p. 10:187 - 10:187 (2010)
The evolution of transcription-associated biases of mutations across vertebrates. BMC Evolutionary Biology 28.
Journal Article
25 (2), pp. 63 - 66 (2009)
Methylation and deamination of CpGs generate p53-binding sites on a genomic scale. Trends in Genetics 29.
Journal Article
25 (12), pp. 2525 - 2535 (2008)
Quantifying the stationarity and time reversibility of the nucleotide substitution process. Molecular Biology and Evolution 30.
Journal Article
4 (5), p. e1000071 - e1000071 (2008)
The Impact of Recombination on Nucleotide Substitutions in the Human Genome e1000071 (2008). PLoS Genetics 31.
Journal Article
18 (8), pp. 1216 - 1223 (2008)
Transcription induces strand-specific mutations at the 5? end of human genes. Genome Research 32.
Journal Article
8 (Suppl) (6), p. S1 - S1 (2007)
The Otto Warburg International Summer School and Workshop on Networks and Regulation. BMC Bioinformatics 33.
Journal Article
7, pp. 191 - 102 (2007)
DNA indels in coding regions reveal selective constraints on protein evolution in the human lineage. BMC Evolutionary Biology 34.
Journal Article
14 (5), pp. 655 - 668 (2007)
Effects of Long-Range Correlations in DNA on Sequence Alignment Score Statistics. Journal of Computational Biology: A Journal of Computational Molecular Cell Biology 35.
Journal Article
24 (5), pp. 1190 - 1197 (2007)
The Majority of Recent Short DNA Insertions in the Human Genome Are Tandem Duplications. Molecular Biology and Evolution: MBE 36.
Journal Article
34, pp. W692 - W695 (2006)
CorGen-measuring and generating long-range correlations for DNA sequence analysis. Nucleic Acids Research 37.
Journal Article
62 (2), pp. 168 - 175 (2006)
A novel method distinguishes between mutation rates and fixation biases in patterns of single-nucleotide substitution. Journal of Molecular Evolution: the Journal of the International Society of Molecular Evolution 38.
Journal Article
365, pp. 48 - 56 (2006)
Identification of highly specific localized sequence motifs in human ribosomal protein gene promoters. Gene 39.
Journal Article
Universality of long-range correlations in expansion-randomization systems. Journal of Statistical Mechanics: Theory and Experiment (10), p. P10004 - P10004 (2005)
40.
Journal Article
60(6) (6), pp. 748 - 763 (2005)
Substantial Regional Variation in Substitution Rates in the Human Genome: Importance of GC Content, Gene Density, and Telomere-Specific Effects. Journal of Molecular Evolution: the Journal of the International Society of Molecular Evolution