Publications of Martin Vingron

Pape, U. J.; Vingron, M.: Statistics for Co-Occurrence of DNA Motifs. 2008 International Workshop on Applied Probability, Université de Technologie de Compiègne, France, July 07, 2008 - July 10, 2008. (2008)

Pape, U.; Vingron, M.: Statistical detection of co-operative transcription factors with similarity adjustment. In: Proceedings of the German Conference on Bioinformatics, GCB, pp. 96 - 105 (Ed. Andreas Beyer, M. S.). German Conference on Bioinformatics (GCB), Dresden, September 09, 2008 - September 12, 2008. GI (2008)

Klein, H.; Vingron, M.: Using Transcription Factor Binding Site Co-Occurrence to Predict Regulatory Regions. The Seventh Annual International Workshop on Bioinformatics and Systems Biology, Institute of Medical Science, The University of Tokyo, Japan, July 31, 2007 - August 02, 2007. Genome Informatics 18, pp. 109 - 118 (2007)

Luz, H.; Staub, E.; Vingron, M.: About the interrelation of evolutionary rate and protein age. Sixth International Workshop on Bioinformatics and Systems Biology, Boston University, USA, July 24, 2006 - July 26, 2006. Genome Informatics: Japanese Society for Bioinformatics 17 (1), pp. 240 - 250 (2006)

Manke, T.; Demetrius, L.; Vingron, M.: Lethality and entropy of protein interaction networks. In: Genome informatics series: proceedings of the ... Workshop on Genome Informatics. Workshop on Genome Informatics, pp. 159 - 163 (Eds. Heinrich, R.; DeLisi, C.; Kanehisa, M.; Miyano, a. S.). Fifth International Workshop on Bioinformatics and Systems Biology, Berlin, Germany, August 22, 2005 - August 25, 2005. Universal Academy Press, Tokyo (2005)

Dyczkowski, J.; Vingron, M.: Comparative analysis of cell cycle regulated genes in eukaryotes. Fifth International Workshop on Bioinformatics and Systems Biology, Humboldt University Berlin, Germany, August 22, 2005 - August 25, 2005. Genome Informatics 16 (1), pp. 125 - 131 (2005)

Klau, G. W.; Rahmann, S.; Schliep, A.; Vingron, M.; Reinert, K.: Optimal robust non-unique probe selection using Integer Linear Programming. Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology, Glasgow, UK, July 31, 2004 - August 04, 2004. Bioinformatics 20 (Suppl.), pp. i186 - i193 (2004)

Dieterich, C.; Rahmann, S.; Vingron, M.: Functional inference from non-random distributions of conserved predicted transcription factor binding sites. Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology, Glasgow, UK, July 31, 2004 - August 04, 2004. Bioinformatics 20 (Suppl.), pp. i109 - i115 (2004)

Meinel, T.; Vingron, M.; Krause, A.: The SYSTERS protein family database: taxon-related protein family size distributions and singleton frequencies. In: Proceedings of the German Conference on Bioinformatics (GCB '03), pp. 103 - 108 (Eds. Mewes, H.-W.; Frishman, D.; Heun, V.; Kramer, S.). German Conference on Bioinformatics, Neuherberg/Garching near Munich, October 12, 2003 - October 14, 2003. (2003)

Heber, S.; Stoye, J.; Frohme, M.; Hoheisel, J.; Vingron, M.: Resampling Methods in Physical Mapping. In: Classification, Automation, and New Media, pp. 437 - 444. Proceedings of the 24th Annual Conference of the Gesellschaft für Klassifikation, University of Passau, March 15, 2000 - March 17, 2000. Springer-Verlag, Heidelberg (2002)

Huber, W.; von Heydebreck, A.; Gunawan, B.; Vingron, M.; Füzesi, L.; Poustka, A.; Sültmann, H.: Transcription profiling of renal cell carcinoma. Annual Meeting of the German Society for Pathology, Wien, April 03, 2002 - April 06, 2002., (2002)

Meinel, T.; Krause, A.; Stoye, J.; Schmidt, A.; Luz, H.; Vingron, M.: The SYSTERS Protein Family Webserver. In: European Conference on Computational Biology 2002 (ECCB 2002) in conjunction with the German Conference on Bioinformatics 2002 (GCB 2002), p. / - /. European Conference on Computational Biology 2002 (ECCB 2002), Congress Centrum Saar, Saarbrücken, October 06, 2002 - October 09, 2002. (2002)

von Heydebreck, A.; Huber, W.; Poustka, A.; Vingron, M.: Variance stabilization and robust normalization for microarray gene expression data. In: Proceedings in Computational Statistics, pp. 623 - 628 (Eds. Härdle, W.; Rönz, B.). COMPSTAT 2002 - Proceedings in Computational Statistics - 15th Symposium, Berlin, August 24, 2002 - August 28, 2002. Physika Verlag, Heidelberg (2002)

Moeinzadeh, M.; Yang, J.; Vingron, M.: Haplotype reconstruction for polyploid organisms. BREW 2015: Bioinformatics Research and Education Workshop, University of Tartu, Tartu, Estonia (2015)

Moeinzadeh, M.; Yang, J.; Vingron, M.: Haplotype reconstruction for sweet potato (Ipomoea Batatas [L.] Lam). 19. International Conference on Research in Computational Molecular Biology (RECOMB 2015), Warsaw (2015)

Zhao, Y.: Correspondence analysis based biclustering and joint visualization of cells and genes for single cell transcriptomic data. Dissertation (2024)

Thedinga, K.: Machine Learning for Cancer Survival Prediction. Dissertation (2024)

Wang, G.: Copy number variation characterization using nanopore sequencing. Dissertation (2024)

Kibar, G.: Exploring feature identification and machine learning in predicting protein-protein interactions of disordered proteins. Dissertation (2024)

Rosebrock, D.: Dissecting regional heterogeneity and modeling transcriptional cascades in brain organoids. Dissertation, vii, 129 pp. (2023)