Our publications listed in the Puplication Repository of the Max Planck Society (PuRe)

Journal Article (71)

61.
Journal Article
Mutzel, V.; Schulz, E. G.: Dosage Sensing, Threshold Responses, and Epigenetic Memory: A Systems Biology Perspective on Random X‐Chromosome Inactivation. Bioessays 42 (4), e1900163 (2020)
62.
Journal Article
van Jaarsveld, M. T. M.; Deng, D.; Ordoñez-Rueda, D.; Paulsen, M.; Wiemer, E. A. C.; Zi, Z.: Cell-type-specific role of CHK2 in mediating DNA damage-induced G2 cell cycle arrest. Oncogenesis 9, 35 (2020)
63.
Journal Article
Gokhman, D.; Nissim-Rafinia, M.; Agranat-Tamir, L.; Housman, G.; García-Pérez, R.; Lizano, E.; Cheronet, O.; Mallick, S.; Nieves-Colón, M. A.; Li, H. et al.; Alpaslan-Roodenberg, S.; Novak, M.; Gu, H.; Osinski, J. M.; Ferrando-Bernal, M.; Gelabert, P.; Lipende, I.; Mjungu, D.; Kondova, I.; Bontrop, R.; Kullmer, O.; Weber, G.; Shahar, T.; Dvir-Ginzberg, M.; Faerman, M.; Quillen, E. E.; Meissner, A.; Lahav, Y.; Kandel, L.; Liebergall, M.; Prada, M. E.; Vidal, J. M.; Gronostajski, R. M.; Stone, A. C.; Yakir, B.; Lalueza-Fox, C.; Pinhasi, R.; Reich, D.; Marques-Bonet, T.; Meshorer, E.; Carmel, L.: Differential DNA methylation of vocal and facial anatomy genes in modern humans. Nature Communications 11, 1189 (2020)
64.
Journal Article
Mayer, A.: Genome Transcription Regulation During Cell Differentiation. Scientia 133, pp. 6 - 9 (2020)
65.
Journal Article
Bratovič, M.; Fonfara, I.; Chylinski, K.; Gálvez, E. J. C.; Sullivan, T. J.; Boerno, S.; Timmermann, B.; Boettcher, M.; Charpentier, E.: Bridge helix arginines play a critical role in Cas9 sensitivity to mismatches. Nature Chemical Biology 16 (5), pp. 587 - 595 (2020)
66.
Journal Article
Ilik, I. A.; Aktas, T.; Maticzka, D.; Backofen, R.; Akhtar, A.: FLASH: ultra-fast protocol to identify RNA-protein interactions in cells. Nucelic Acids Research 48 (3), Article e15 (2020)
67.
Journal Article
Holzhütter, H.-G.; Wuensch, T.; Gajowski, R.; Berndt, N.; Bulik, S.; Meierhofer, D.; Stockmann, M.: A novel variant of the 13C-methacetin liver function breath test that eliminates the confounding effect of individual differences in sytemic CO2 kinetics. Archives of Toxicology 94 (2), pp. 401 - 415 (2020)
68.
Journal Article
Bagherpoor Helabad, M.; Volkenandt, S.; Imhof, P.: Molecular Dynamics Simulations of a Chimeric Androgen Receptor Protein (SPARKI) Confirm the Importance of the Dimerization Domain on DNA Binding Specificity. Frontiers in Molecular Biosciences 7, 4 (2020)
69.
Journal Article
Kupke, S. Y.; Ly, L.-H.; Börno, S. T.; Ruff, A.; Timmermann, B.; Vingron, M.; Haas, S.: Single-Cell Analysis Uncovers a Vast Diversity in Intracellular Viral Defective Interfering RNA Content Affecting the Large Cell-to-Cell Heterogeneity in Influenza A Virus Replication. Viruses 12 (1), 71 (2020)
70.
Journal Article
Alvarez-Dominguez, J. R.; Donaghey, J.; Rasouli, N.; Kenty, J. H. R.; Helman, A.; Charlton, J.; Straubhaar, J. R.; Meissner, A.; Melton, D. A.: Circadian Entrainment Triggers Maturation of Human In Vitro Islets. Cell Stem Cell 26 (1), pp. 108 - 122 (2020)
71.
Journal Article
Lampignano , R.; Neumann, M. H.D.; Weber, S.; Kloten, V.; Herdean, A.; Voss, T.; Groelz, D.; Babayan, A.; Tibbesma, M.; Schlumpberger, M. et al.; Chemi, F.; Rothwell, D. G.; Wikman, H.; Galizzi, J.-P.; Bergheim, I. R.; Russnes, H.; Mussolin, B.; Bonin, S.; Voigt, C.; Musa, H.; Pinzani, P.; Lianidou, E.; Brady, G.; Speicher, M. R.; Pantel, K.; Betsou, F.; Schuuring, E.; Kubista, M.; Ammerlaan, W.; Sprenger-Haussels, M.; Schlange, T.; Heitzer, E.; Lehrach, H.; Yaspo, M.-L.: Multicenter Evaluation of Circulating Cell-Free DNA Extraction and Downstream Analyses for the Development of Standardized (Pre)analytical Work Flows. Clinical Chemistry: International Journal of Molecular Diagnostics and Laboratory Medicine 66 (1), pp. 149 - 160 (2020)

Conference Paper (6)

72.
Conference Paper
Meissner, A.; Hirsch, C.; Fritz, G.; Adjaye, J.; Schupp, N.: iPSC differentiating into renal proximal tubular cells are vulnerable to oxidative stress. 27th Annual Conference of the Society-for-Redox-Biology-and-Medicine (SfRBM) (Virtual meeting), November 18, 2020 - November 20, 2020. Free Radical Biology and Medicine 159, pp. S109 - S110 (2020)
73.
Conference Paper
Klever, M.-K.; Sträng, E.; Jungnitsch, J.; Melo, U. S.; Hetzel, S.; Dolnik, A.; Schöpflin, R.; Schrezenmeier, J. F.; Blau, O.; Westermann, J. et al.; Döhner, K.; Schrezenmeier, H.; Spielmann, M.; Meissner, A.; Mundlos, S.; Bullinger, L.: Integration of Hi-C and Nanopore Sequencing for Structural Variant Analysis in AML with a Complex Karyotype: (Chromothripsis)². 62nd Annual Meeting and Exposition of the American Society of Hematology (ASH) (Virtual meeting), December 05, 2020 - December 08, 2020. Blood 136, Article 28, (2020)
74.
Conference Paper
Knisbacher, B. A.; Lin, Z.; Hahn, C. K.; Nadeu, F.; Duran-Ferrer, M.; Stevenson, K. E.; Tausch, E.; Barbera-Mourelle, A.; Dunford, A.; Anand, S. et al.; Delgado, J.; Hess, J. M.; Taylor-Weiner, A.; Kretzmer, H.; Bousquets Muñoz, P.; Shaughnessy, C. J.; Fernandes, S. M.; Sivina, M.; Rassenti, L. Z.; Meissner, A.; Wiestner, A. ....; Getz, G.: The CLL-1100 Project: Towards Complete Genomic Characterization and Improved Prognostics for CLL. 62nd Annual Meeting and Exposition of the American-Society-of-Hematology (ASH) (Virtual meeting), December 05, 2020 - December 08, 2020. Blood 136, Article 3, (2020)
75.
Conference Paper
Pan, H.; Renaud, L.; Chaligne, R.; Bloehdorn, J.; Tausch, E.; Mertens, D.; Fink, A.-M.; Fischer, K.; Zhang, C.; Betel , D. et al.; Gnirke, A.; Imielinski, M.; Moreaux , J.; Hallek, M.; Meissner, A.; Stilgenbauer, S.; Wu, C. J.; Elemento, O.; Landau, D. A.: Robust Discovery of Candidate DNA Methylation Cancer Drivers. 62nd Annual Meeting and Exposition of the American Society of Hematology (ASH) (Virtual meeting), December 05, 2020 - December 08, 2020. Blood 136, pp. 33 - 34 (2020)
76.
Conference Paper
Cifuentes Fontanals, L.; Tonello, E.; Siebert, H.: Control Strategy Identification via Trap Spaces in Boolean Networks. In: CMSB 2020, part of Lecture Notes in Computer Science 12314, Vol. LNBI 12314, pp. 159 - 175 (Eds. Abate, A.; Petrov, T.; Wolf, V.). 18th International Conference, CMSB 2019: Computational Methods in Systems Biology, Konstanz, September 23, 2020 - September 25, 2020. Springer Nature Switzerland AG, Cham, Switzerland (2020)
77.
Conference Paper
Rossmann, M.; Hoi, K.; Chan, V.; Abraham, B.; Yang, S.; Mullahoo, J.; Papanastasiou, M.; Elia, I.; Vyas, S.; Nag, P. et al.; Sullivan, L.; Perlin, J.; Hagedorn, E.; Hetzel, S.; Weigert, R.; Warren, C.; Dorjsuren, B.; Custo Greig, E.; Adatto, I.; Cowan, C.; Schreiber, S.; Young, R.; Meissner, A.; Haigis, M.; Carr, S.; Zon, L.: Transcriptional regulation of mitochondrial metabolism by TIF1γ drives erythroid progenitor differentiation. 49th Annual Scientific Meeting of the ISEH - International Society for Experimental Hematology (Virtual Meeting), New York City, USA, August 19, 2020 - August 21, 2020. Experimental Hematology 88, S35, (2020)

Thesis - PhD (2)

78.
Thesis - PhD
Sbailò, L.: Efficient multi-scale sampling methods in statistical physics. Dissertation, xiv, 120 pp. (2020)
79.
Thesis - PhD
Krakau, S.: Statistical models to capture protein-RNA interaction footprints from truncation-based CLIP-seq data. Dissertation, viii, 167 S pp. (2020)

Thesis - Master (5)

80.
Thesis - Master
Gassaloglu, S. I.: Molecular recording of mouse embryonic stem cell derived Trunk-Like-Structures. Master (2020)
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